Lineage for Protein: Melibiase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081902Protein Melibiase [75064] (4 species)

Species:

  1. 2081903Chicken (Gallus gallus) [TaxId:9031] [75065] (2 PDB entries)
    alpha-N-acetylgalactosaminidase
    1. Domain for 1ktb:
    2. Domain for 1ktc:
  2. 2081906Human (Homo sapiens) [TaxId:9606] [102062] (17 PDB entries)
    alpha-galactosidase A
    1. Domains for 1r46:
      1. 2081937Domain d1r46a2: 1r46 A:32-323 [96974]
        Other proteins in same PDB: d1r46a1, d1r46b1
        complexed with edo, nag
      2. 2081938Domain d1r46b2: 1r46 B:32-323 [96976]
        Other proteins in same PDB: d1r46a1, d1r46b1
        complexed with edo, nag
    2. Domains for 1r47:
      1. 2081939Domain d1r47a2: 1r47 A:32-323 [96978]
        Other proteins in same PDB: d1r47a1, d1r47b1
        complexed with edo, gal
      2. 2081940Domain d1r47b2: 1r47 B:32-323 [96980]
        Other proteins in same PDB: d1r47a1, d1r47b1
        complexed with edo, gal
    3. Domains for 3gxn:
      1. 2081935Domain d3gxna1: 3gxn A:32-323 [246384]
        Other proteins in same PDB: d3gxna2, d3gxnb2
        automated match to d3hg3a1
        complexed with so4
      2. 2081936Domain d3gxnb1: 3gxn B:32-323 [246386]
        Other proteins in same PDB: d3gxna2, d3gxnb2
        automated match to d3hg3a1
        complexed with so4
    4. Domains for 3gxp:
      1. 2081923Domain d3gxpa1: 3gxp A:32-323 [210722]
        Other proteins in same PDB: d3gxpa2, d3gxpb2
        automated match to d1r46a2
        protein/RNA complex; complexed with gla, man, nag, so4, tam
      2. 2081924Domain d3gxpb1: 3gxp B:32-323 [210724]
        Other proteins in same PDB: d3gxpa2, d3gxpb2
        automated match to d1r46b2
        protein/RNA complex; complexed with gla, man, nag, so4, tam
    5. Domains for 3gxt:
      1. 2081933Domain d3gxta1: 3gxt A:32-323 [210726]
        Other proteins in same PDB: d3gxta2, d3gxtb2
        automated match to d1r46a2
        protein/RNA complex; complexed with nag, noj, so4
      2. 2081934Domain d3gxtb1: 3gxt B:32-323 [210728]
        Other proteins in same PDB: d3gxta2, d3gxtb2
        automated match to d1r46b2
        protein/RNA complex; complexed with nag, noj, so4
    6. Domains for 3hg2:
      1. 2081917Domain d3hg2a1: 3hg2 A:32-323 [211016]
        Other proteins in same PDB: d3hg2a2, d3hg2b2
        automated match to d1r46a2
        complexed with acy, gal, nag, so4
      2. 2081918Domain d3hg2b1: 3hg2 B:32-323 [211018]
        Other proteins in same PDB: d3hg2a2, d3hg2b2
        automated match to d1r46b2
        complexed with acy, gal, nag, so4
    7. Domains for 3hg3:
      1. 2081907Domain d3hg3a1: 3hg3 A:32-323 [232468]
        Other proteins in same PDB: d3hg3a2, d3hg3b2
        automated match to d1r46a2
        complexed with 2pe, nag
      2. 2081908Domain d3hg3b1: 3hg3 B:32-323 [232470]
        Other proteins in same PDB: d3hg3a2, d3hg3b2
        automated match to d1r46a2
        complexed with 2pe, nag
    8. Domains for 3hg4:
      1. 2081915Domain d3hg4a1: 3hg4 A:32-323 [211020]
        Other proteins in same PDB: d3hg4a2, d3hg4b2
        automated match to d1r46a2
        complexed with 7jz, acy, gal, nag, so4
      2. 2081916Domain d3hg4b1: 3hg4 B:32-323 [211022]
        Other proteins in same PDB: d3hg4a2, d3hg4b2
        automated match to d1r46b2
        complexed with 7jz, acy, gal, nag, so4
    9. Domains for 3hg5:
      1. 2081921Domain d3hg5a1: 3hg5 A:32-323 [211024]
        Other proteins in same PDB: d3hg5a2, d3hg5b2
        automated match to d1r46a2
        complexed with acy, gal, gla, nag, so4
      2. 2081922Domain d3hg5b1: 3hg5 B:32-323 [211026]
        Other proteins in same PDB: d3hg5a2, d3hg5b2
        automated match to d1r46b2
        complexed with acy, gal, gla, nag, so4
    10. Domains for 3lx9:
      1. 2081909Domain d3lx9a1: 3lx9 A:32-323 [232854]
        Other proteins in same PDB: d3lx9a2, d3lx9b2
        automated match to d1r46a2
        complexed with a2g, nag
      2. 2081910Domain d3lx9b1: 3lx9 B:32-323 [232855]
        Other proteins in same PDB: d3lx9a2, d3lx9b2
        automated match to d1r46a2
        complexed with a2g, nag
    11. Domains for 3lxa:
      1. 2081931Domain d3lxaa1: 3lxa A:32-323 [247529]
        Other proteins in same PDB: d3lxaa2, d3lxab2
        automated match to d3hg3a1
        complexed with gla, nag
      2. 2081932Domain d3lxab1: 3lxa B:32-323 [247531]
        Other proteins in same PDB: d3lxaa2, d3lxab2
        automated match to d3hg3a1
        complexed with gla, nag
    12. Domains for 3lxb:
      1. 2081929Domain d3lxba1: 3lxb A:32-323 [247533]
        Other proteins in same PDB: d3lxba2, d3lxbb2
        automated match to d3lx9a1
        complexed with gol, nag
      2. 2081930Domain d3lxbb1: 3lxb B:32-323 [247535]
        Other proteins in same PDB: d3lxba2, d3lxbb2
        automated match to d3lx9a1
        complexed with gol, nag
    13. Domains for 3lxc:
      1. 2081919Domain d3lxca1: 3lxc A:32-323 [247537]
        Other proteins in same PDB: d3lxca2, d3lxcb2
        automated match to d3lx9a1
        complexed with gol, nag
      2. 2081920Domain d3lxcb1: 3lxc B:32-323 [247539]
        Other proteins in same PDB: d3lxca2, d3lxcb2
        automated match to d3lx9a1
        complexed with gol, nag
    14. Domains for 3s5y:
      1. 2081913Domain d3s5ya1: 3s5y A:32-323 [216219]
        Other proteins in same PDB: d3s5ya2, d3s5yb2
        automated match to d1r46a2
        complexed with 2pe, acy, dgj, edo, nag
      2. 2081914Domain d3s5yb1: 3s5y B:32-323 [216221]
        Other proteins in same PDB: d3s5ya2, d3s5yb2
        automated match to d1r46b2
        complexed with 2pe, acy, dgj, edo, nag
    15. Domains for 3s5z:
      1. 2081911Domain d3s5za1: 3s5z A:32-323 [216223]
        Other proteins in same PDB: d3s5za2, d3s5zb2
        automated match to d1r46a2
        complexed with gal, gla, gol, nag
      2. 2081912Domain d3s5zb1: 3s5z B:32-323 [216225]
        Other proteins in same PDB: d3s5za2, d3s5zb2
        automated match to d1r46a2
        complexed with gal, gla, gol, nag
    16. Domains for 3tv8:
      1. 2081925Domain d3tv8a1: 3tv8 A:32-323 [250036]
        Other proteins in same PDB: d3tv8a2, d3tv8b2
        automated match to d3hg3a1
        complexed with 2pe, dgj, nag, so4
      2. 2081926Domain d3tv8b1: 3tv8 B:32-323 [250038]
        Other proteins in same PDB: d3tv8a2, d3tv8b2
        automated match to d3hg3a1
        complexed with 2pe, dgj, nag, so4
    17. Domains for 4nxs:
      1. 2081927Domain d4nxsa1: 4nxs A:32-323 [257194]
        Other proteins in same PDB: d4nxsa2, d4nxsb2
        automated match to d1r46a2
        complexed with 2oz, nag, so4
      2. 2081928Domain d4nxsb1: 4nxs B:32-323 [257196]
        Other proteins in same PDB: d4nxsa2, d4nxsb2
        automated match to d1r46b2
        complexed with 2oz, nag, so4
  3. 2081941Rice (Oryza sativa) [TaxId:4530] [89468] (1 PDB entry)
    alpha-galactosidase
  4. 2081943Trichoderma reesei [TaxId:51453] [110349] (2 PDB entries)
    Alpha-galactosidase agl1
    Uniprot Q92456
    1. Domain for 1szn:
    2. Domain for 1t0o:

More info for Protein Melibiase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Melibiase from c.1.8.1: Amylase, catalytic domain: