Lineage for Protein: Xylanase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2082160Family c.1.8.3: beta-glycanases [51487] (27 protein domains)
    consist of a number of sequence families
  6. 2082649Protein Xylanase [51488] (6 species)

Species:

  1. 2082650Bacillus stearothermophilus, Ixt6 [TaxId:1422] [102063] (7 PDB entries)
    intra-cellular xylanase
    1. Domains for 1n82:
      1. 2082653Domain d1n82a_: 1n82 A: [91703]
        complexed with gol, na
      2. 2082654Domain d1n82b_: 1n82 B: [91704]
        complexed with gol, na
    2. Domains for 2q8x:
      1. 2082651Domain d2q8xa_: 2q8x A: [167481]
        automated match to d1n82a_
        complexed with gol, na
      2. 2082652Domain d2q8xb_: 2q8x B: [167482]
        automated match to d1n82a_
        complexed with gol, na
    3. Domains for 3ms8:
      1. 2082661Domain d3ms8a_: 3ms8 A: [181521]
        automated match to d1n82a_
        complexed with gol, na
      2. 2082662Domain d3ms8b_: 3ms8 B: [181522]
        automated match to d1n82a_
        complexed with gol, na
    4. Domains for 3msd:
      1. 2082659Domain d3msda_: 3msd A: [181526]
        automated match to d1n82a_
        complexed with act, gol, na
      2. 2082660Domain d3msdb_: 3msd B: [181527]
        automated match to d1n82a_
        complexed with act, gol, na
    5. Domains for 3msg:
      1. 2082655Domain d3msga_: 3msg A: [181528]
        automated match to d1n82a_
        complexed with act, gol, na, xyp
      2. 2082656Domain d3msgb_: 3msg B: [181529]
        automated match to d1n82a_
        complexed with act, gol, na, xyp
    6. Domains for 3mua:
      1. 2082657Domain d3muaa_: 3mua A: [181561]
        automated match to d1n82a_
        complexed with act, gol, na, xyp
      2. 2082658Domain d3muab_: 3mua B: [181562]
        automated match to d1n82a_
        complexed with act, gol, na, xyp
    7. Domains for 3mui:
      1. 2082663Domain d3muia_: 3mui A: [181567]
        automated match to d1n82a_
        complexed with gol, na
      2. 2082664Domain d3muib_: 3mui B: [181568]
        automated match to d1n82a_
        complexed with gol, na
  2. 2082665Bacillus stearothermophilus, Xt6 [TaxId:1422] [69386] (8 PDB entries)
    Uniprot P40943
    1. Domain for 1hiz:
    2. Domain for 1r85:
    3. Domain for 1r86:
    4. Domain for 1r87:
    5. Domain for 3mmd:
    6. Domain for 4prw:
    7. Domain for 4pud:
    8. Domain for 4pue:
  3. 2082674Cellvibrio mixtus [TaxId:39650] [102064] (4 PDB entries)
    1. Domain for 1uqy:
    2. Domain for 1uqz:
    3. Domain for 1ur1:
    4. Domain for 1ur2:
  4. 2082679Clostridium thermocellum, XynZ [TaxId:1515] [51489] (1 PDB entry)
    belongs to family F
  5. 2082682Fungus (Penicillium simplicissimum) [TaxId:69488] [51490] (1 PDB entry)
    belongs to family 10
  6. 2082684Thermotoga maritima [TaxId:2336] [141772] (1 PDB entry)
    Uniprot Q9WXS5 23-346

More info for Protein Xylanase from c.1.8.3: beta-glycanases

Timeline for Protein Xylanase from c.1.8.3: beta-glycanases: