Lineage for Species: European mistletoe (Viscum album) [TaxId: 3972]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2053108Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 2053527Superfamily b.42.2: Ricin B-like lectins [50370] (4 families) (S)
  5. 2053528Family b.42.2.1: Ricin B-like [50371] (11 protein domains)
  6. 2053614Protein Plant cytotoxin B-chain (lectin) [50372] (5 species)
    duplication: consists of two domains of this fold
  7. 2053627Species European mistletoe (Viscum album) [TaxId:3972] [50375] (12 PDB entries)
    different sequence variants
    Uniprot Q6ITZ3 266-520; Uniprot P81446 269-531 # 91% sequence identity

PDB entries in Species: European mistletoe (Viscum album) [TaxId: 3972]:

  1. Domain(s) for 1ce7:
    1. 2053646Domain d1ce7b1: 1ce7 B:1-133 [25565]
      Other proteins in same PDB: d1ce7a_
      complexed with nag
    2. 2053647Domain d1ce7b2: 1ce7 B:134-255 [25566]
      Other proteins in same PDB: d1ce7a_
      complexed with nag
  2. Domain(s) for 1m2t:
    1. 2053628Domain d1m2tb1: 1m2t B:249-384 [84762]
      Other proteins in same PDB: d1m2ta_
      complexed with ade, fuc, gol, nag
    2. 2053629Domain d1m2tb2: 1m2t B:385-510 [84763]
      Other proteins in same PDB: d1m2ta_
      complexed with ade, fuc, gol, nag
  3. Domain(s) for 1onk:
    1. 2053630Domain d1onkb1: 1onk B:1-137 [93360]
      Other proteins in same PDB: d1onka_
      complexed with azi, gol, nag, po4
    2. 2053631Domain d1onkb2: 1onk B:138-263 [93361]
      Other proteins in same PDB: d1onka_
      complexed with azi, gol, nag, po4
  4. Domain(s) for 1oql:
    1. 2053640Domain d1oqlb1: 1oql B:1-137 [87307]
      Other proteins in same PDB: d1oqla_
      complexed with gal, nag
    2. 2053641Domain d1oqlb2: 1oql B:138-263 [87308]
      Other proteins in same PDB: d1oqla_
      complexed with gal, nag
  5. Domain(s) for 1pc8:
    1. 2053650Domain d1pc8b1: 1pc8 B:1-133 [104105]
      Other proteins in same PDB: d1pc8a_
      complexed with nag
    2. 2053651Domain d1pc8b2: 1pc8 B:134-255 [104106]
      Other proteins in same PDB: d1pc8a_
      complexed with nag
  6. Domain(s) for 1pum:
    1. 2053636Domain d1pumb1: 1pum B:1-137 [104315]
      Other proteins in same PDB: d1puma_
      complexed with cl, gal, gol, nag, so4
    2. 2053637Domain d1pumb2: 1pum B:138-263 [104316]
      Other proteins in same PDB: d1puma_
      complexed with cl, gal, gol, nag, so4
  7. Domain(s) for 1puu:
    1. 2053634Domain d1puub3: 1puu B:1-138 [197465]
      Other proteins in same PDB: d1puua_
      complexed with cl, dio, gol, lat, nag, so4
    2. 2053635Domain d1puub4: 1puu B:139-263 [197466]
      Other proteins in same PDB: d1puua_
      complexed with cl, dio, gol, lat, nag, so4
  8. Domain(s) for 1sz6:
    1. 2053632Domain d1sz6b1: 1sz6 B:1-137 [112172]
      Other proteins in same PDB: d1sz6a_
      complexed with azi, cl, gol, nag, so4
    2. 2053633Domain d1sz6b2: 1sz6 B:138-263 [112173]
      Other proteins in same PDB: d1sz6a_
      complexed with azi, cl, gol, nag, so4
  9. Domain(s) for 1tfm:
    1. 2053644Domain d1tfmb1: 1tfm B:1-133 [106856]
      Other proteins in same PDB: d1tfma_
      complexed with gal, nag, p6c
    2. 2053645Domain d1tfmb2: 1tfm B:134-255 [106857]
      Other proteins in same PDB: d1tfma_
      complexed with gal, nag, p6c
  10. Domain(s) for 1yf8:
    1. 2053642Domain d1yf8b1: 1yf8 B:1-133 [123052]
      Other proteins in same PDB: d1yf8a_
      automated match to d1tfmb1
      complexed with gal, nag, p6c
    2. 2053643Domain d1yf8b2: 1yf8 B:134-255 [123053]
      Other proteins in same PDB: d1yf8a_
      automated match to d1tfmb2
      complexed with gal, nag, p6c
  11. Domain(s) for 2mll:
    1. 2053648Domain d2mllb1: 2mll B:1-133 [25567]
      Other proteins in same PDB: d2mlla_
      complexed with nag
    2. 2053649Domain d2mllb2: 2mll B:134-255 [25568]
      Other proteins in same PDB: d2mlla_
      complexed with nag
  12. Domain(s) for 2r9k:
    1. 2053638Domain d2r9kb1: 2r9k B:249-384 [151790]
      Other proteins in same PDB: d2r9ka_
      automated match to d1m2tb1
      complexed with cl, gol, nag, sgi, so4
    2. 2053639Domain d2r9kb2: 2r9k B:385-510 [151791]
      Other proteins in same PDB: d2r9ka_
      automated match to d1m2tb2
      complexed with cl, gol, nag, sgi, so4

More info for Species European mistletoe (Viscum album) [TaxId:3972] from b.42.2.1 Plant cytotoxin B-chain (lectin)

Timeline for Species European mistletoe (Viscum album) [TaxId:3972] from b.42.2.1 Plant cytotoxin B-chain (lectin):