PDB entry 1tfm

View 1tfm on RCSB PDB site
Description: crystal structure of a ribosome inactivating protein in its naturally inhibited form
Class: toxin
Keywords: PROTEIN-INHIBITOR COMPLEX, BETA TREFOIL, Ribosome inactivating protein, TOXIN
Deposited on 2004-05-27, released 2004-07-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Himalayan mistletoe ribosome-inactivating protein
    Species: Viscum album [TaxId:3972]
    Database cross-references and differences (RAF-indexed):
    • GB AAT37532 (0-239)
    Domains in SCOPe 2.08: d1tfma_
  • Chain 'B':
    Compound: Himalayan mistletoe ribosome-inactivating protein
    Species: Viscum album [TaxId:3972]
    Database cross-references and differences (RAF-indexed):
    • GB AAT37532 (0-254)
    Domains in SCOPe 2.08: d1tfmb1, d1tfmb2
  • Heterogens: NAG, P6C, GAL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1tfmA (A:)
yerldldvtsqttgeeyfrfitllrdyvssgsfsneipllrqsgggveaarfvlveltne
ggdsitaaidvtnlyvvayqagsqsyflsgpgthlftgttrsslpfngsypdleqyaghr
kqiplgidqliqsvtalrfpgntrtqarsililiqmiseaarfnpilwrarqyinsgasf
lpdvymleletswgqqstqvqqstegvfnnpirlaipgnfvtltnvrdviaslaimlfvc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1tfmB (B:)
csaseptvrivgrngmnvdvrdddfhdgnqiqlwpsksnndpnqlwtikrdgtirsngsc
lttygytagvyvmifdcntavreatiwqiwgngtiinprsnlalaassgikgttltvqtl
dytlgqgwlagndtaprevtiygfndlcmesnggsvwvetcvsqqndrwalygdgsirpe
qnqdqcltsgrdsvaginivscsggssgqrwvftnegailnlknglamdvanpglgqiii
ypatgkpnqmwlpvp