PDB entry 2r9k

View 2r9k on RCSB PDB site
Description: Crystal Structure of Misteltoe Lectin I in Complex with Phloretamide
Class: hydrolase
Keywords: ML-I, phloretamide, Viscum album, Glycoprotein, Hydrolase, Lectin, Plant defense, Protein synthesis inhibitor, Toxin
Deposited on 2007-09-13, released 2007-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-17.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-galactoside-specific lectin 1
    Species: Viscum album [TaxId:3972]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P81446 (0-End)
      • see remark 999 (7-9)
      • see remark 999 (14)
      • see remark 999 (18)
      • see remark 999 (22)
      • see remark 999 (35)
      • see remark 999 (44)
      • see remark 999 (48-49)
      • see remark 999 (60)
      • see remark 999 (64)
      • see remark 999 (80)
      • see remark 999 (83)
      • see remark 999 (89)
      • see remark 999 (93)
      • see remark 999 (98-99)
      • see remark 999 (101)
      • see remark 999 (105)
      • see remark 999 (108)
      • see remark 999 (147)
      • see remark 999 (149)
      • see remark 999 (207)
      • see remark 999 (218)
      • see remark 999 (222)
      • see remark 999 (225-226)
      • see remark 999 (232)
    Domains in SCOPe 2.08: d2r9ka_
  • Chain 'B':
    Compound: Beta-galactoside-specific lectin 1
    Species: Viscum album [TaxId:3972]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P81446 (Start-262)
      • see remark 999 (1)
      • see remark 999 (5)
      • see remark 999 (10)
      • see remark 999 (20)
      • see remark 999 (53)
      • see remark 999 (89)
      • see remark 999 (91)
      • see remark 999 (142)
      • see remark 999 (155)
      • see remark 999 (160)
      • see remark 999 (165-167)
      • see remark 999 (169)
      • see remark 999 (186)
      • see remark 999 (188)
      • see remark 999 (193)
      • see remark 999 (198)
      • see remark 999 (241)
      • see remark 999 (243)
      • see remark 999 (253)
    Domains in SCOPe 2.08: d2r9kb1, d2r9kb2
  • Heterogens: NAG, SO4, GOL, CL, SGI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2r9kA (A:)
yerlrlrtdqqttgaeyfsfitvlrdyvssgsfsnnipllrqstvpvsegqrfvlveltn
aggdtitaaidvtnlyvvayeagnqsyflsdapagaetqdfsgttsssqpfngsypdler
yaghrdqiplgidqliqsvtalrfpggqtktqarsililiqmiseaarfnpilwrarqyi
nsgasflpdvymleletswgqqstqvqhstdgvfnnpialaiapgvivtltnirdviasl
aimlfvcgerpsss

    Sequence, based on observed residues (ATOM records): (download) 
    >2r9kA (A:)
yerlrlrtdqqttgaeyfsfitvlrdyvssgsfsnnipllrqstvpvsegqrfvlveltn
aggdtitaaidvtnlyvvayeagnqsyflsdapagaetqdfsgttsssqpfngsypdler
yaghrdqiplgidqliqsvtalrfpggqtktqarsililiqmiseaarfnpilwrarqyi
nsgasflpdvymleletswgqqstqvqhstdgvfnnpialaiapgvivtltnirdviasl
aimlfvcg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2r9kB (B:)
davtctasepivrivgrngmtvdvrdddfhdgnqiqlwpsksnndpnqlwtikkdgtirs
ngsclttygytagvyvmifdcntavreatiwqiwgngtiinprsnlvlaassgikgttlt
vqtldytlgqgwlagndtaprettiygfrdlcmesaggsvyvetctagqenqrwalygdg
sirpkqlqsqcltngrdsistvinivscsagssgqrwvftnegailnlknglamdvaqan
pslqriiiypatgnpnqmwlpvp

    Sequence, based on observed residues (ATOM records): (download) 
    >2r9kB (B:)
avtctasepivrivgrngmtvdvrdddfhdgnqiqlwpsksnndpnqlwtikkdgtirsn
gsclttygytagvyvmifdcntavreatiwqiwgngtiinprsnlvlaassgikgttltv
qtldytlgqgwlagndtaprettiygfrdlcmesaggsvyvetctagqenqrwalygdgs
irpkqlqsqcltngrdsistvinivscsagssgqrwvftnegailnlknglamdvaqanp
slqriiiypatgnpnqmwlpvp