Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1984734Fold a.5: RuvA C-terminal domain-like [46928] (9 superfamilies)
    3 helices; bundle, right-handed twist
  4. 1984948Superfamily a.5.3: CRAL/TRIO N-terminal domain [46938] (2 families) (S)
  5. 1984967Family a.5.3.0: automated matches [227224] (1 protein)
    not a true family
  6. 1984968Protein automated matches [226965] (3 species)
    not a true protein

Species:

  1. 1984969Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [225408] (5 PDB entries)
    1. Domain for 3b74:
    2. Domain for 3b7n:
    3. Domains for 3b7q:
      1. 1984972Domain d3b7qa1: 3b7q A:4-94 [208551]
        Other proteins in same PDB: d3b7qa2, d3b7qb2
        automated match to d1auaa1
        complexed with 6pl, gol, po4
      2. 1984973Domain d3b7qb1: 3b7q B:3-94 [208553]
        Other proteins in same PDB: d3b7qa2, d3b7qb2
        automated match to d1auaa1
        complexed with 6pl, gol, po4
    4. Domain for 3b7z:
    5. Domain for 3q8g:
  2. 1984976Human (Homo sapiens) [TaxId:9606] [258515] (4 PDB entries)
    1. Domains for 4omj:
      1. 1984980Domain d4omja1: 4omj A:1-75 [271395]
        Other proteins in same PDB: d4omja2, d4omjb2
        automated match to d1olma1
        complexed with 2tx, cl, so4
      2. 1984981Domain d4omjb1: 4omj B:1-75 [271400]
        Other proteins in same PDB: d4omja2, d4omjb2
        automated match to d1olma1
        complexed with 2tx, cl, so4
    2. Domains for 4omk:
      1. 1984982Domain d4omka1: 4omk A:1-75 [271397]
        Other proteins in same PDB: d4omka2, d4omkb2
        automated match to d1olma1
        complexed with cl, ipa, so4, sql
      2. 1984983Domain d4omkb1: 4omk B:1-75 [271401]
        Other proteins in same PDB: d4omka2, d4omkb2
        automated match to d1olma1
        complexed with cl, ipa, so4, sql
    3. Domains for 4tlg:
      1. 1984978Domain d4tlga1: 4tlg A:3-75 [258516]
        Other proteins in same PDB: d4tlga2, d4tlga3, d4tlgb2, d4tlgb3
        automated match to d1olma1
        complexed with 11a, edo
      2. 1984979Domain d4tlgb1: 4tlg B:7-75 [258517]
        Other proteins in same PDB: d4tlga2, d4tlga3, d4tlgb2, d4tlgb3
        automated match to d1olma1
        complexed with 11a, edo
    4. Domain for 4uyb:
  3. 1984984Mouse (Mus musculus) [TaxId:10090] [233924] (2 PDB entries)
    1. Domains for 3w67:
      1. 1984989Domain d3w67a1: 3w67 A:25-90 [233925]
        Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
        automated match to d1oiza1
        complexed with 3pt, viv
      2. 1984990Domain d3w67b1: 3w67 B:23-90 [239899]
        Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
        automated match to d3w68b1
        complexed with 3pt, viv
      3. 1984991Domain d3w67c1: 3w67 C:26-90 [239901]
        Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
        automated match to d3w67a1
        complexed with 3pt, viv
      4. 1984992Domain d3w67d1: 3w67 D:25-90 [239903]
        Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
        automated match to d3w67a1
        complexed with 3pt, viv
    2. Domains for 3w68:
      1. 1984985Domain d3w68a1: 3w68 A:25-90 [236499]
        Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
        automated match to d3w67a1
        complexed with 4pt, pbu, po4, viv
      2. 1984986Domain d3w68b1: 3w68 B:23-90 [236494]
        Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
        automated match to d3w67a1
        complexed with 4pt, pbu, po4, viv
      3. 1984987Domain d3w68c1: 3w68 C:26-90 [236492]
        Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
        automated match to d3w67a1
        complexed with 4pt, pbu, po4, viv
      4. 1984988Domain d3w68d1: 3w68 D:25-90 [236503]
        Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
        automated match to d3w67a1
        complexed with 4pt, pbu, po4, viv

More info for Protein automated matches from a.5.3.0: automated matches

Timeline for Protein automated matches from a.5.3.0: automated matches: