SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.5: RuvA C-terminal domain-like [46928] (9 superfamilies)
3 helices; bundle, right-handed twist
Superfamily a.5.2: UBA-like [46934] (5 families)
Family a.5.2.1: UBA domain [46935] (25 proteins)
Protein automated matches [190533] (3 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187496] (3 PDB entries)
1. Domains for 2bwb:
  1. Domain d2bwba_: 2bwb A: [129329]
    automated match to d1wr1b1
  2. Domain d2bwbb_: 2bwb B: [129330]
    automated match to d1wr1b1
  3. Domain d2bwbc_: 2bwb C: [129331]
    automated match to d1wr1b1
  4. Domain d2bwbd_: 2bwb D: [129332]
    automated match to d1wr1b1
  5. Domain d2bwbe_: 2bwb E: [129333]
    automated match to d1wr1b1
  6. Domain d2bwbf_: 2bwb F: [129334]
    automated match to d1wr1b1
  7. Domain d2bwbg_: 2bwb G: [129335]
    automated match to d1wr1b1
  8. Domain d2bwbh_: 2bwb H: [129336]
    automated match to d1wr1b1
  9. Domain d2bwbi_: 2bwb I: [129337]
    automated match to d1wr1b1
2. Domains for 2bwe:
  1. Domain d2bweb_: 2bwe B: [129343]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  2. Domain d2bwec_: 2bwe C: [129344]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  3. Domain d2bwed_: 2bwe D: [129345]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  4. Domain d2bwee_: 2bwe E: [129346]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  5. Domain d2bwef_: 2bwe F: [129347]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  6. Domain d2bweg_: 2bwe G: [129348]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  7. Domain d2bweh_: 2bwe H: [129349]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  8. Domain d2bwei_: 2bwe I: [129350]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  9. Domain d2bwej_: 2bwe J: [129351]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  10. Domain d2bwek_: 2bwe K: [129352]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  11. Domain d2bwel_: 2bwe L: [129353]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  12. Domain d2bwem_: 2bwe M: [129354]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  13. Domain d2bwen_: 2bwe N: [129355]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  14. Domain d2bweo_: 2bwe O: [129356]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  15. Domain d2bwep_: 2bwe P: [129357]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  16. Domain d2bweq_: 2bwe Q: [129358]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
  17. Domain d2bwer_: 2bwe R: [129359]
    Other proteins in same PDB: d2bwea1, d2bwes1, d2bwet_, d2bweu_
    automated match to d1wr1b1
3. Domain for 4un2:
  - Domain d4un2b1: 4un2 B:328-369 [259302]
    Other proteins in same PDB: d4un2a_, d4un2b2
    automated match to d1wr1b1
Human (Homo sapiens) [TaxId:9606] [255306] (4 PDB entries)
1. Domain for 2jy5:
  - Domain d2jy5a1: 2jy5 A:541-586 [242310]
    Other proteins in same PDB: d2jy5a2, d2jy5a3
    automated match to d2dnaa1
2. Domain for 2jy6:
  - Domain d2jy6b1: 2jy6 B:541-586 [238760]
    Other proteins in same PDB: d2jy6a_, d2jy6b2, d2jy6b3
    automated match to d2dnaa1
3. Domain for 2mgw:
  - Domain d2mgwa1: 2mgw A:913-959 [243185]
    Other proteins in same PDB: d2mgwa2
    automated match to d2cp8a1
4. Domain for 2mj5:
  - Domain d2mj5b1: 2mj5 B:913-959 [243190]
    Other proteins in same PDB: d2mj5a_, d2mj5b2
    automated match to d2cp8a1
Mouse (Mus musculus) [TaxId:10090] [190002] (3 PDB entries)
1. Domain for 2knz:
  - Domain d2knza1: 2knz A:6-53 [242588]
    Other proteins in same PDB: d2knza2
    automated match to d2dnaa1
2. Domain for 2rru:
  - Domain d2rrua1: 2rru A:6-53 [243762]
    Other proteins in same PDB: d2rrua2
    automated match to d1q02a_
3. Domains for 3b0f:
  1. Domain d3b0fa_: 3b0f A: [172401]
    automated match to d1q02a_
    complexed with so4
  2. Domain d3b0fb_: 3b0f B: [172402]
    automated match to d1q02a_
    complexed with so4

More info for Protein automated matches from a.5.2.1: UBA domain

Timeline for Protein automated matches from a.5.2.1: UBA domain:

Protein automated matches from a.5.2.1: UBA domain first appeared in SCOPe 2.01
Protein automated matches from a.5.2.1: UBA domain appears in SCOPe 2.07