Lineage for Protein: Phosphoglycerate dehydrogenase

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2438294Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2440267Superfamily c.23.12: Formate/glycerate dehydrogenase catalytic domain-like [52283] (3 families) (S)
  5. 2440268Family c.23.12.1: Formate/glycerate dehydrogenases, substrate-binding domain [52284] (7 protein domains)
    this domain is interrupted by the Rossmann-fold domain
  6. 2440292Protein Phosphoglycerate dehydrogenase [52293] (2 species)
    has additional C-terminal domain of the ferredoxin fold

Species:

  1. 2440293Escherichia coli [TaxId:562] [52294] (7 PDB entries)
    1. Domains for 1psd:
      1. 2440311Domain d1psda2: 1psd A:7-107,A:296-326 [31357]
        Other proteins in same PDB: d1psda1, d1psda3, d1psdb1, d1psdb3
        complexed with nad, ser
      2. 2440312Domain d1psdb2: 1psd B:7-107,B:296-326 [31358]
        Other proteins in same PDB: d1psda1, d1psda3, d1psdb1, d1psdb3
        complexed with nad, ser
    2. Domains for 1sc6:
      1. 2440294Domain d1sc6a2: 1sc6 A:7-107,A:296-326 [118933]
        Other proteins in same PDB: d1sc6a1, d1sc6a3, d1sc6b1, d1sc6b3, d1sc6c1, d1sc6c3, d1sc6d1, d1sc6d3
        automatically matched to d1psda2
        complexed with nad
      2. 2440295Domain d1sc6b2: 1sc6 B:7-107,B:296-326 [118936]
        Other proteins in same PDB: d1sc6a1, d1sc6a3, d1sc6b1, d1sc6b3, d1sc6c1, d1sc6c3, d1sc6d1, d1sc6d3
        automatically matched to d1psda2
        complexed with nad
      3. 2440296Domain d1sc6c2: 1sc6 C:9-107,C:299-326 [118939]
        Other proteins in same PDB: d1sc6a1, d1sc6a3, d1sc6b1, d1sc6b3, d1sc6c1, d1sc6c3, d1sc6d1, d1sc6d3
        automatically matched to d1psda2
        complexed with nad
      4. 2440297Domain d1sc6d2: 1sc6 D:7-107,D:296-326 [118942]
        Other proteins in same PDB: d1sc6a1, d1sc6a3, d1sc6b1, d1sc6b3, d1sc6c1, d1sc6c3, d1sc6d1, d1sc6d3
        automatically matched to d1psda2
        complexed with nad
    3. Domains for 1yba:
      1. 2440298Domain d1ybaa2: 1yba A:7-107,A:296-326 [122873]
        Other proteins in same PDB: d1ybaa1, d1ybaa3, d1ybab1, d1ybab3, d1ybac1, d1ybac3, d1ybad1, d1ybad3
        automatically matched to d1psda2
        complexed with akg, nad, po4, unl
      2. 2440299Domain d1ybab2: 1yba B:7-107,B:296-326 [122876]
        Other proteins in same PDB: d1ybaa1, d1ybaa3, d1ybab1, d1ybab3, d1ybac1, d1ybac3, d1ybad1, d1ybad3
        automatically matched to d1psda2
        complexed with akg, nad, po4, unl
      3. 2440300Domain d1ybac2: 1yba C:7-107,C:296-326 [122879]
        Other proteins in same PDB: d1ybaa1, d1ybaa3, d1ybab1, d1ybab3, d1ybac1, d1ybac3, d1ybad1, d1ybad3
        automatically matched to d1psda2
        complexed with akg, nad, po4, unl
      4. 2440301Domain d1ybad2: 1yba D:7-107,D:296-326 [122882]
        Other proteins in same PDB: d1ybaa1, d1ybaa3, d1ybab1, d1ybab3, d1ybac1, d1ybac3, d1ybad1, d1ybad3
        automatically matched to d1psda2
        complexed with akg, nad, po4, unl
    4. Domains for 2p9c:
      1. 2440302Domain d2p9ca2: 2p9c A:7-107,A:296-326 [139557]
        Other proteins in same PDB: d2p9ca1, d2p9ca3, d2p9cb1, d2p9cb3
        automatically matched to d1psda2
        complexed with nai, ser; mutant
      2. 2440303Domain d2p9cb2: 2p9c B:7-107,B:296-326 [139560]
        Other proteins in same PDB: d2p9ca1, d2p9ca3, d2p9cb1, d2p9cb3
        automatically matched to d1psda2
        complexed with nai, ser; mutant
    5. Domains for 2p9e:
      1. 2440304Domain d2p9ea2: 2p9e A:7-107,A:296-326 [139563]
        Other proteins in same PDB: d2p9ea1, d2p9ea3, d2p9eb1, d2p9eb3, d2p9ec1, d2p9ec3, d2p9ed1, d2p9ed3
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
      2. 2440305Domain d2p9eb2: 2p9e B:7-107,B:296-326 [139566]
        Other proteins in same PDB: d2p9ea1, d2p9ea3, d2p9eb1, d2p9eb3, d2p9ec1, d2p9ec3, d2p9ed1, d2p9ed3
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
      3. 2440306Domain d2p9ec2: 2p9e C:7-107,C:296-326 [139569]
        Other proteins in same PDB: d2p9ea1, d2p9ea3, d2p9eb1, d2p9eb3, d2p9ec1, d2p9ec3, d2p9ed1, d2p9ed3
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
      4. 2440307Domain d2p9ed2: 2p9e D:8-107,D:296-326 [139572]
        Other proteins in same PDB: d2p9ea1, d2p9ea3, d2p9eb1, d2p9eb3, d2p9ec1, d2p9ec3, d2p9ed1, d2p9ed3
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
    6. Domains for 2p9g:
      1. 2440308Domain d2p9ga2: 2p9g A:7-107,A:296-326 [139575]
        Other proteins in same PDB: d2p9ga1, d2p9ga3, d2p9gb1, d2p9gb3
        automatically matched to d1psda2
        complexed with nai, ser; mutant
      2. 2440309Domain d2p9gb2: 2p9g B:7-107,B:296-326 [139578]
        Other proteins in same PDB: d2p9ga1, d2p9ga3, d2p9gb1, d2p9gb3
        automatically matched to d1psda2
        complexed with nai, ser; mutant
    7. Domain for 2pa3:
  2. 2440313Mycobacterium tuberculosis [TaxId:1773] [142063] (2 PDB entries)
    Uniprot P0A544 2-97,282-315
    there is an intervening domain between this domain and regulatory (C-terminal) domain
    1. Domains for 1ygy:
      1. 2440314Domain d1ygya2: 1ygy A:3-98,A:283-316 [123151]
        Other proteins in same PDB: d1ygya1, d1ygya3, d1ygya4, d1ygyb1, d1ygyb3, d1ygyb4
        complexed with tar
      2. 2440315Domain d1ygyb2: 1ygy B:3-98,B:283-316 [123155]
        Other proteins in same PDB: d1ygya1, d1ygya3, d1ygya4, d1ygyb1, d1ygyb3, d1ygyb4
        automated match to d1ygya2
        complexed with tar
    2. Domains for 3dc2:
      1. 2440316Domain d3dc2a1: 3dc2 A:4-98,A:283-316 [209071]
        Other proteins in same PDB: d3dc2a2, d3dc2a3, d3dc2a4, d3dc2b2, d3dc2b3, d3dc2b4
        automated match to d1ygya2
        complexed with ser, tla
      2. 2440317Domain d3dc2b1: 3dc2 B:4-98,B:283-316 [209075]
        Other proteins in same PDB: d3dc2a2, d3dc2a3, d3dc2a4, d3dc2b2, d3dc2b3, d3dc2b4
        automated match to d1ygya2
        complexed with ser, tla

More info for Protein Phosphoglycerate dehydrogenase from c.23.12.1: Formate/glycerate dehydrogenases, substrate-binding domain

Timeline for Protein Phosphoglycerate dehydrogenase from c.23.12.1: Formate/glycerate dehydrogenases, substrate-binding domain: