Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily) 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest |
Superfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (3 families) |
Family c.59.1.0: automated matches [254241] (1 protein) not a true family |
Protein automated matches [254550] (5 species) not a true protein |
Escherichia coli [TaxId:562] [255259] (8 PDB entries) |
Domain d2jffa2: 2jff A:298-437 [138304] Other proteins in same PDB: d2jffa1, d2jffa3, d2jffa4 automated match to d2jfga2 complexed with lk2, so4 |
Domain d2jfga2: 2jfg A:298-437 [138307] Other proteins in same PDB: d2jfga1, d2jfga3, d2jfga4 automated match to d2jfga2 complexed with adp, so4, uma |
Domain d2jfha2: 2jfh A:298-437 [138310] Other proteins in same PDB: d2jfha1, d2jfha3, d2jfha4 automated match to d2jfga2 complexed with lk1, so4 |
Domain d2uuoa2: 2uuo A:298-437 [152198] Other proteins in same PDB: d2uuoa1, d2uuoa3, d2uuoa4 automated match to d4uaga2 complexed with lk3, so4 |
Domain d2uupa2: 2uup A:298-437 [152201] Other proteins in same PDB: d2uupa1, d2uupa3, d2uupa4 automated match to d4uaga2 complexed with lk4, so4 |
Domain d2vtda3: 2vtd A:298-437 [243941] Other proteins in same PDB: d2vtda1, d2vtda2, d2vtda4 automated match to d4uaga2 complexed with lkm, so4 |
Domain d2vtea3: 2vte A:298-437 [243944] Other proteins in same PDB: d2vtea1, d2vtea2, d2vtea4 automated match to d4uaga2 complexed with ik4, so4 |
Domain d2xpca3: 2xpc A:298-437 [244567] Other proteins in same PDB: d2xpca1, d2xpca2, d2xpca4 automated match to d4uaga2 complexed with 051, cl, dms, so4 |
Escherichia coli [TaxId:668369] [255651] (2 PDB entries) |
Domain d2wjpa3: 2wjp A:298-437 [244149] Other proteins in same PDB: d2wjpa1, d2wjpa2, d2wjpa4 automated match to d4uaga2 complexed with azi, cl, d17, dms, so4 |
Domain d2x5oa3: 2x5o A:298-437 [244427] Other proteins in same PDB: d2x5oa1, d2x5oa2, d2x5oa4 automated match to d4uaga2 complexed with azi, cl, so3, so4, vsv |
Escherichia coli [TaxId:83333] [316491] (1 PDB entry) |
Pseudomonas aeruginosa, PA01 [TaxId:208964] [271628] (3 PDB entries) |
Domain d4cvka3: 4cvk A:320-451 [271631] Other proteins in same PDB: d4cvka1, d4cvka2 automated match to d1gg4a1 complexed with ala, api, fga, mub, udp |
Domain d4cvla3: 4cvl A:320-451 [271629] Other proteins in same PDB: d4cvla1, d4cvla2 automated match to d1gg4a1 complexed with acp, mg |
Domain d4cvma3: 4cvm A:320-451 [271632] Other proteins in same PDB: d4cvma1, d4cvma2 automated match to d1gg4a1 complexed with ala, anp, fga, mg, mub, udp |
Yersinia pestis [TaxId:214092] [256292] (1 PDB entry) |
Domain d4hv4a3: 4hv4 A:323-483 [252520] Other proteins in same PDB: d4hv4a1, d4hv4a2, d4hv4b1, d4hv4b2 automated match to d1gqya2 complexed with amp, bme |
Domain d4hv4b3: 4hv4 B:323-483 [252523] Other proteins in same PDB: d4hv4a1, d4hv4a2, d4hv4b1, d4hv4b2 automated match to d1gqya2 complexed with amp, bme |
Timeline for Protein automated matches from c.59.1.0: automated matches: