Lineage for d2vtda3 (2vtd A:298-437)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2127920Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest
  4. 2127921Superfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (3 families) (S)
  5. 2127963Family c.59.1.0: automated matches [254241] (1 protein)
    not a true family
  6. 2127964Protein automated matches [254550] (5 species)
    not a true protein
  7. 2127965Species Escherichia coli [TaxId:562] [255259] (8 PDB entries)
  8. 2127970Domain d2vtda3: 2vtd A:298-437 [243941]
    Other proteins in same PDB: d2vtda1, d2vtda2, d2vtda4
    automated match to d4uaga2
    complexed with lkm, so4

Details for d2vtda3

PDB Entry: 2vtd (more details), 1.94 Å

PDB Description: crystal structure of murd ligase in complex with d-glu containing sulfonamide inhibitor
PDB Compounds: (A:) udp-n-acetylmuramoylalanine--d-glutamate ligase

SCOPe Domain Sequences for d2vtda3:

Sequence; same for both SEQRES and ATOM records: (download)

>d2vtda3 c.59.1.0 (A:298-437) automated matches {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2vtda3:

Click to download the PDB-style file with coordinates for d2vtda3.
(The format of our PDB-style files is described here.)

Timeline for d2vtda3: