Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1635622Fold d.6: Prion-like [54097] (1 superfamily)
    beta-alpha-beta-alpha(2); antiparallel beta-ribbon
  4. 1635623Superfamily d.6.1: Prion-like [54098] (1 family) (S)
  5. 1635624Family d.6.1.1: Prion-like [54099] (3 proteins)
  6. 1635688Protein automated matches [191016] (6 species)
    not a true protein

Species:

  1. 1635689Golden hamster (Mesocricetus auratus) [TaxId:10036] [255433] (1 PDB entry)
  2. 1635691Horse (Equus caballus) [TaxId:9796] [255378] (1 PDB entry)
  3. 1635693Human (Homo sapiens) [TaxId:9606] [188783] (8 PDB entries)
    1. Domain for 2k1d:
    2. Domain for 2w9e:
    3. Domain for 3haf:
    4. Domain for 3hak:
    5. Domains for 3her:
      1. 1635695Domain d3hera_: 3her A: [246491]
        automated match to d1fo7a_
        complexed with cd
      2. 1635696Domain d3herb_: 3her B: [246492]
        automated match to d1fo7a_
        complexed with cd
    6. Domains for 3hj5:
      1. 1635701Domain d3hj5a_: 3hj5 A: [246498]
        automated match to d1fo7a_
      2. 1635702Domain d3hj5b_: 3hj5 B: [246499]
        automated match to d1fo7a_
    7. Domain for 3hjx:
    8. Domain for 4dgi:
  4. 1635704Mouse (Mus musculus) [TaxId:10090] [234629] (12 PDB entries)
    1. Domain for 2k5o:
    2. Domain for 2kfm:
    3. Domain for 2kfo:
    4. Domain for 2ku5:
    5. Domain for 2ku6:
    6. Domain for 2l1d:
    7. Domain for 2l1e:
    8. Domain for 2l1h:
    9. Domain for 2l1k:
    10. Domain for 2l39:
    11. Domain for 2l40:
    12. Domain for 4h88:
  5. 1635717Myodes glareolus [TaxId:447135] [255321] (1 PDB entry)
  6. 1635719Rabbit (Oryctolagus cuniculus) [TaxId:9986] [226669] (6 PDB entries)
    1. Domain for 2fj3:
    2. Domain for 2joh:
    3. Domain for 2jom:
    4. Domains for 4hls:
      1. 1635720Domain d4hlsa_: 4hls A: [222660]
        automated match to d1xywa_
        complexed with cl, gol, na; mutant
      2. 1635721Domain d4hlsb_: 4hls B: [222661]
        automated match to d1xywa_
        complexed with cl, gol, na; mutant
    5. Domains for 4hmm:
      1. 1635722Domain d4hmma_: 4hmm A: [222673]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant
      2. 1635723Domain d4hmmb_: 4hmm B: [222674]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant
    6. Domains for 4hmr:
      1. 1635724Domain d4hmra_: 4hmr A: [222675]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant
      2. 1635725Domain d4hmrb_: 4hmr B: [222676]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant

More info for Protein automated matches from d.6.1.1: Prion-like

Timeline for Protein automated matches from d.6.1.1: Prion-like: