PDB entry 3hj5

View 3hj5 on RCSB PDB site
Description: Human prion protein variant V129 domain swapped dimer
Class: membrane protein
Keywords: Prion protein, Cell membrane, Disease mutation, Disulfide bond, Glycoprotein, Golgi apparatus, GPI-anchor, Lipoprotein, Membrane, Polymorphism, Prion, MEMBRANE PROTEIN
Deposited on 2009-05-20, released 2010-01-12
The last revision prior to the SCOPe 2.04 freeze date was dated 2010-01-12, with a file datestamp of 2010-01-08.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.237
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: major prion protein
    Species: Homo sapiens [TaxId:9606]
    Gene: PRNP, PRIP, PRP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3hj5a_
  • Chain 'B':
    Compound: major prion protein
    Species: Homo sapiens [TaxId:9606]
    Gene: PRNP, PRIP, PRP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3hj5b_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3hj5A (A:)
gqgggthsqwnkpskpktnmkhmagaaaagavvgglggyvlgsamsrpiihfgsdyedry
yrenmhrypnqvyyrpmdeysnqnnfvhdcvnitikqhtvttttkgenftetdvkmmerv
veqmcitqyeresqayyqrgss

    Sequence, based on observed residues (ATOM records): (download) 
    >3hj5A (A:)
lggyvlgsamsrpiihfgsdyedryyrenmhrypnqvyyrpmdeysnqnnfvhdcvniti
kqhtvttttkgenftetdvkmmervveqmcitqyeresqay

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3hj5B (B:)
gqgggthsqwnkpskpktnmkhmagaaaagavvgglggyvlgsamsrpiihfgsdyedry
yrenmhrypnqvyyrpmdeysnqnnfvhdcvnitikqhtvttttkgenftetdvkmmerv
veqmcitqyeresqayyqrgss

    Sequence, based on observed residues (ATOM records): (download) 
    >3hj5B (B:)
ggyvlgsamsrpiihfgsdyedryyrenmhrypnqvyyrpmdeysnqnnfvhdcvnitik
qhtvttttkgenftetdvkmmervveqmcitqyeresqayyq