SCOPe 2.08: Species: Human (Homo sapiens), ubc9 [TaxId: 9606]

Lineage for Species: Human (Homo sapiens), ubc9 [TaxId: 9606]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.20: UBC-like [54494] (1 superfamily)
alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
Superfamily d.20.1: UBC-like [54495] (5 families)
Family d.20.1.1: UBC-related [54496] (7 proteins)
Protein Ubiquitin conjugating enzyme, UBC [54497] (34 species)
Species Human (Homo sapiens), ubc9 [TaxId:9606] [54503] (29 PDB entries)
identical sequence in many other species

PDB entries in Species: Human (Homo sapiens), ubc9 [TaxId: 9606]:

Domain(s) for 1a3s:
- Domain d1a3sa_: 1a3s A: [38335]
Domain(s) for 1kps:
1. Domain d1kpsa1: 1kps A:1-158 [68786]
  Other proteins in same PDB: d1kpsa2, d1kpsb_, d1kpsd_
  complexed with so4
2. Domain d1kpsc_: 1kps C: [68788]
  Other proteins in same PDB: d1kpsa2, d1kpsb_, d1kpsd_
  complexed with so4
Domain(s) for 1u9a:
- Domain d1u9aa_: 1u9a A: [38333]
  CASP2
Domain(s) for 1u9b:
- Domain d1u9ba_: 1u9b A: [38334]
Domain(s) for 1z5s:
- Domain d1z5sa_: 1z5s A: [124491]
  Other proteins in same PDB: d1z5sb_, d1z5sc1
  automated match to d1kpsa_
Domain(s) for 2grn:
- Domain d2grna_: 2grn A: [135568]
  Other proteins in same PDB: d2grnb1
  automated match to d1u9b__
Domain(s) for 2gro:
- Domain d2groa_: 2gro A: [161438]
  Other proteins in same PDB: d2grob_
  automated match to d1u9ba_
Domain(s) for 2grp:
- Domain d2grpa_: 2grp A: [161439]
  Other proteins in same PDB: d2grpb_
  automated match to d1u9ba_
Domain(s) for 2grq:
- Domain d2grqa_: 2grq A: [161440]
  Other proteins in same PDB: d2grqb_
  automated match to d1u9ba_
Domain(s) for 2grr:
- Domain d2grra_: 2grr A: [161441]
  Other proteins in same PDB: d2grrb_
  automated match to d1u9aa_
Domain(s) for 2o25:
1. Domain d2o25c_: 2o25 C: [138890]
  Other proteins in same PDB: d2o25a1, d2o25a2, d2o25b1, d2o25b2
  automated match to d1kpsa_
2. Domain d2o25d_: 2o25 D: [138891]
  Other proteins in same PDB: d2o25a1, d2o25a2, d2o25b1, d2o25b2
  automated match to d1kpsa_
Domain(s) for 2pe6:
- Domain d2pe6a2: 2pe6 A:1-158 [139667]
  Other proteins in same PDB: d2pe6a3, d2pe6b_
  automated match to d1u9b__
Domain(s) for 2px9:
- Domain d2px9b_: 2px9 B: [149906]
  automated match to d1kpsa_
Domain(s) for 2uyz:
- Domain d2uyza1: 2uyz A:3-158 [145768]
  Other proteins in same PDB: d2uyzb_
  annotated as mouse protein in PDB
  complexed with na
Domain(s) for 2vrr:
- Domain d2vrra_: 2vrr A: [153522]
  Other proteins in same PDB: d2vrrb2, d2vrrb3
  automated match to d1a3sa_
  complexed with fmt, na
Domain(s) for 2xwu:
- Domain d2xwua_: 2xwu A: [170451]
  automated match to d1a3sa_
Domain(s) for 3a4s:
1. Domain d3a4sa_: 3a4s A: [171724]
  Other proteins in same PDB: d3a4sb2, d3a4sc_, d3a4sd_
  automated match to d1kpsa_
  protein/RNA complex
2. Domain d3a4sb1: 3a4s B:1-158 [171725]
  Other proteins in same PDB: d3a4sb2, d3a4sc_, d3a4sd_
  automated match to d1kpsa_
  protein/RNA complex
Domain(s) for 3uin:
- Domain d3uina_: 3uin A: [186327]
  Other proteins in same PDB: d3uinb_, d3uinc_
  automated match to d1a3sa_
Domain(s) for 3uio:
- Domain d3uioa_: 3uio A: [186329]
  Other proteins in same PDB: d3uiob_, d3uioc_
  automated match to d1a3sa_
Domain(s) for 3uip:
- Domain d3uipa_: 3uip A: [186331]
  Other proteins in same PDB: d3uipb_, d3uipc_
  automated match to d1a3sa_
Domain(s) for 4y1l:
1. Domain d4y1la_: 4y1l A: [272444]
  Other proteins in same PDB: d4y1lc1, d4y1lc2
  automated match to d1kpsa_
2. Domain d4y1lb_: 4y1l B: [272443]
  Other proteins in same PDB: d4y1lc1, d4y1lc2
  automated match to d1kpsa_
Domain(s) for 5d2m:
1. Domain d5d2ma_: 5d2m A: [278940]
  Other proteins in same PDB: d5d2mb_, d5d2mc_, d5d2me1, d5d2me2, d5d2mf_
  automated match to d2pe6a_
  complexed with edo
2. Domain d5d2md_: 5d2m D: [278942]
  Other proteins in same PDB: d5d2mb_, d5d2mc_, d5d2me1, d5d2me2, d5d2mf_
  automated match to d2pe6a_
  complexed with edo
Domain(s) for 5f6d:
- Domain d5f6da_: 5f6d A: [316275]
  automated match to d1u9aa_
  complexed with 5vj
Domain(s) for 5f6e:
- Domain d5f6ea_: 5f6e A: [316302]
  automated match to d1u9aa_
  complexed with edo
Domain(s) for 5f6u:
- Domain d5f6ua_: 5f6u A: [316267]
  automated match to d1u9aa_
  complexed with 5vk
Domain(s) for 5f6v:
- Domain d5f6va_: 5f6v A: [316274]
  automated match to d1u9aa_
  complexed with 5vl
Domain(s) for 5f6w:
- Domain d5f6wa_: 5f6w A: [316317]
  automated match to d1u9aa_
  complexed with 5vl
Domain(s) for 5f6x:
- Domain d5f6xa_: 5f6x A: [316284]
  automated match to d1u9aa_
  complexed with 5vm
Domain(s) for 5f6y:
- Domain d5f6ya_: 5f6y A: [316286]
  automated match to d1u9aa_
  complexed with 5vm

More info for Species Human (Homo sapiens), ubc9 [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC

Timeline for Species Human (Homo sapiens), ubc9 [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC:

Species Human (Homo sapiens), ubc9 [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC first appeared (with stable ids) in SCOP 1.55, called Species Human (Homo sapiens), ubc9 [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme
Species Human (Homo sapiens), ubc9 [TaxId:9606] from d.20.1.1 Ubiquitin conjugating enzyme, UBC appears in SCOPe 2.07