Lineage for d5d2me1 (5d2m E:15-93)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158435Protein SUMO-2 [117816] (1 species)
  7. 2158436Species Human (Homo sapiens) [TaxId:9606] [117817] (9 PDB entries)
    Uniprot P61956
  8. 2158441Domain d5d2me1: 5d2m E:15-93 [278941]
    Other proteins in same PDB: d5d2ma_, d5d2mc_, d5d2md_, d5d2me2, d5d2mf_
    automated match to d2ckhb1
    complexed with edo

Details for d5d2me1

PDB Entry: 5d2m (more details), 2.4 Å

PDB Description: complex between human sumo2-rangap1, ubc9 and znf451
PDB Compounds: (E:) Small ubiquitin-related modifier 2

SCOPe Domain Sequences for d5d2me1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5d2me1 d.15.1.1 (E:15-93) SUMO-2 {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5d2me1:

Click to download the PDB-style file with coordinates for d5d2me1.
(The format of our PDB-style files is described here.)

Timeline for d5d2me1:

  • d5d2me1 first appeared in SCOPe 2.05, called d5d2me_