SCOPe 2.08: Protein: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain

Lineage for Protein: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.138: Multiheme cytochromes [48694] (1 superfamily)
variable number of helices and little beta structure; not a true fold
annotated by the SCOP(e) curators as 'not a true fold'
Superfamily a.138.1: Multiheme cytochromes [48695] (4 families)
duplication: contains multiple CxxCH motifs

Family a.138.1.3: Di-heme elbow motif [48711] (8 proteins)
the main characteristic feature of this motif is the packing of its two hemes
many members contains one or more complete motifs flanked by incomplete motifs and/or other domains

Protein Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain [48721] (3 species)

Species:

Shewanella frigidimarina [TaxId:56812] [48722] (16 PDB entries)
1. Domain for 1e39:
  - Domain d1e39a1: 1e39 A:1-102 [19694]
    Other proteins in same PDB: d1e39a2, d1e39a3
    complexed with fad, fum, gol, hec, na
2. Domains for 1jrx:
  1. Domain d1jrxa1: 1jrx A:1-102 [67193]
    Other proteins in same PDB: d1jrxa2, d1jrxa3, d1jrxb2, d1jrxb3
    complexed with fad, fum, hem, na; mutant
  2. Domain d1jrxb1: 1jrx B:1-102 [67196]
    Other proteins in same PDB: d1jrxa2, d1jrxa3, d1jrxb2, d1jrxb3
    complexed with fad, fum, hem, na; mutant
3. Domains for 1jry:
  1. Domain d1jrya1: 1jry A:1-102 [67199]
    Other proteins in same PDB: d1jrya2, d1jrya3, d1jryb2, d1jryb3
    complexed with fad, fum, hem, na; mutant
  2. Domain d1jryb1: 1jry B:1-102 [67202]
    Other proteins in same PDB: d1jrya2, d1jrya3, d1jryb2, d1jryb3
    complexed with fad, fum, hem, na; mutant
4. Domains for 1jrz:
  1. Domain d1jrza1: 1jrz A:1-102 [67205]
    Other proteins in same PDB: d1jrza2, d1jrza3, d1jrzb2, d1jrzb3
    complexed with fad, fum, hem, na; mutant
  2. Domain d1jrzb1: 1jrz B:1-102 [67208]
    Other proteins in same PDB: d1jrza2, d1jrza3, d1jrzb2, d1jrzb3
    complexed with fad, fum, hem, na; mutant
5. Domain for 1kss:
  - Domain d1kssa1: 1kss A:1-102 [72928]
    Other proteins in same PDB: d1kssa2, d1kssa3
    complexed with fad, fum, hem, na; mutant
6. Domains for 1ksu:
  1. Domain d1ksua1: 1ksu A:1-102 [72931]
    Other proteins in same PDB: d1ksua2, d1ksua3, d1ksub2, d1ksub3
    complexed with fad, fum, hem, na; mutant
  2. Domain d1ksub1: 1ksu B:1-102 [72934]
    Other proteins in same PDB: d1ksua2, d1ksua3, d1ksub2, d1ksub3
    complexed with fad, fum, hem, na; mutant
7. Domains for 1lj1:
  1. Domain d1lj1a1: 1lj1 A:1-102 [78023]
    Other proteins in same PDB: d1lj1a2, d1lj1a3, d1lj1b2, d1lj1b3
    complexed with fad, fum, hem, na; mutant
  2. Domain d1lj1b1: 1lj1 B:1-102 [78026]
    Other proteins in same PDB: d1lj1a2, d1lj1a3, d1lj1b2, d1lj1b3
    complexed with fad, fum, hem, na; mutant
8. Domains for 1m64:
  1. Domain d1m64a1: 1m64 A:1-102 [78683]
    Other proteins in same PDB: d1m64a2, d1m64a3, d1m64b2, d1m64b3
    complexed with fad, fum, hem, na; mutant
  2. Domain d1m64b1: 1m64 B:1-102 [78686]
    Other proteins in same PDB: d1m64a2, d1m64a3, d1m64b2, d1m64b3
    complexed with fad, fum, hem, na; mutant
9. Domain for 1p2e:
  - Domain d1p2ea1: 1p2e A:1-102 [93926]
    Other proteins in same PDB: d1p2ea2, d1p2ea3
    complexed with acy, fad, fum, hem, na; mutant
10. Domain for 1p2h:
  - Domain d1p2ha1: 1p2h A:1-102 [93930]
    Other proteins in same PDB: d1p2ha2, d1p2ha3
    complexed with fad, hem, na, teo; mutant
11. Domain for 1q9i:
  - Domain d1q9ia1: 1q9i A:1-102 [96273]
    Other proteins in same PDB: d1q9ia2, d1q9ia3
    complexed with fad, hec, na, teo; mutant
12. Domain for 1qjd:
  - Domain d1qjda1: 1qjd A:1-102 [19695]
    Other proteins in same PDB: d1qjda2, d1qjda3
    complexed with fad, gol, hec, na, teo
13. Domains for 1qo8:
  1. Domain d1qo8a1: 1qo8 A:2-102 [19696]
    Other proteins in same PDB: d1qo8a2, d1qo8a3, d1qo8d2, d1qo8d3
    complexed with fad, hem
  2. Domain d1qo8d1: 1qo8 D:2-102 [19697]
    Other proteins in same PDB: d1qo8a2, d1qo8a3, d1qo8d2, d1qo8d3
    complexed with fad, hem
14. Domain for 1y0p:
  - Domain d1y0pa1: 1y0p A:1-102 [122507]
    Other proteins in same PDB: d1y0pa2, d1y0pa3
    automated match to d1qjda1
    complexed with fad, hem, mez, na
15. Domain for 2b7r:
  - Domain d2b7ra1: 2b7r A:1-102 [128049]
    Other proteins in same PDB: d2b7ra2, d2b7ra3
    automatically matched to d1e39a1
    complexed with fad, fum, hem, na; mutant
16. Domain for 2b7s:
  - Domain d2b7sa1: 2b7s A:1-102 [128052]
    Other proteins in same PDB: d2b7sa2, d2b7sa3
    automatically matched to d1e39a1
    complexed with fad, fum, hem, na; mutant
Shewanella oneidensis [TaxId:70863] [74808] (4 PDB entries)
1. Domains for 1m1p:
  1. Domain d1m1pa_: 1m1p A: [74413]
    complexed with hec, so4
  2. Domain d1m1pb_: 1m1p B: [74414]
    complexed with hec, so4
  3. Domain d1m1pc_: 1m1p C: [74415]
    complexed with hec, so4
  4. Domain d1m1pd_: 1m1p D: [74416]
    complexed with hec, so4
  5. Domain d1m1pe_: 1m1p E: [74417]
    complexed with hec, so4
  6. Domain d1m1pf_: 1m1p F: [74418]
    complexed with hec, so4
2. Domain for 1m1q:
  - Domain d1m1qa_: 1m1q A: [74419]
    complexed with hec, so4
3. Domain for 1m1r:
  - Domain d1m1ra_: 1m1r A: [74420]
    complexed with hec, so4
4. Domain for 6ee7:
  - Domain d6ee7a_: 6ee7 A: [372898]
    automated match to d1m1ra_
    complexed with hec, zn
Shewanella putrefaciens [TaxId:24] [48723] (3 PDB entries)
1. Domains for 1d4c:
  1. Domain d1d4ca1: 1d4c A:1-102 [19698]
    Other proteins in same PDB: d1d4ca2, d1d4ca3, d1d4cb2, d1d4cb3, d1d4cc2, d1d4cc3, d1d4cd2, d1d4cd3
    complexed with fad, hec, so4
  2. Domain d1d4cb1: 1d4c B:3-102 [19699]
    Other proteins in same PDB: d1d4ca2, d1d4ca3, d1d4cb2, d1d4cb3, d1d4cc2, d1d4cc3, d1d4cd2, d1d4cd3
    complexed with fad, hec, so4
  3. Domain d1d4cc1: 1d4c C:3-102 [19700]
    Other proteins in same PDB: d1d4ca2, d1d4ca3, d1d4cb2, d1d4cb3, d1d4cc2, d1d4cc3, d1d4cd2, d1d4cd3
    complexed with fad, hec, so4
  4. Domain d1d4cd1: 1d4c D:1-102 [19701]
    Other proteins in same PDB: d1d4ca2, d1d4ca3, d1d4cb2, d1d4cb3, d1d4cc2, d1d4cc3, d1d4cd2, d1d4cd3
    complexed with fad, hec, so4
2. Domain for 1d4d:
  - Domain d1d4da1: 1d4d A:4-102 [19702]
    Other proteins in same PDB: d1d4da2, d1d4da3
    complexed with fad, hec, sin
3. Domain for 1d4e:
  - Domain d1d4ea1: 1d4e A:4-102 [19703]
    Other proteins in same PDB: d1d4ea2, d1d4ea3
    complexed with fad, fum, hec

More info for Protein Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain from a.138.1.3: Di-heme elbow motif

Timeline for Protein Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain from a.138.1.3: Di-heme elbow motif:

Protein Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain from a.138.1.3: Di-heme elbow motif first appeared (with stable ids) in SCOP 1.55
Protein Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain from a.138.1.3: Di-heme elbow motif appears in SCOPe 2.07