Lineage for Family a.138.1.3: Di-heme elbow motif

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.138: Multiheme cytochromes [48694] (1 superfamily)
    variable number of helices and little beta structure; not a true fold
  4. Superfamily a.138.1: Multiheme cytochromes [48695] (4 families) (S)
    duplication: contains multiple CxxCH motifs
  5. Family a.138.1.3: Di-heme elbow motif [48711] (8 proteins)
    the main characteristic feature of this motif is the packing of its two hemes
    many members contains one or more complete motifs flanked by incomplete motifs and/or other domains

Proteins:

  1. Cytochrome c nitrite reductase [48718] (5 species)
    1. Species Desulfovibrio desulfuricans [TaxId:876] [89173] (1 PDB entry)
    2. Species Escherichia coli K-12 [TaxId:83333] [188395] (1 PDB entry)
    3. Species Escherichia coli [TaxId:562] [74807] (1 PDB entry)
    4. Species Sulfurospirillum deleyianum [TaxId:65553] [48719] (1 PDB entry)
    5. Species Wolinella succinogenes [TaxId:844] [48720] (3 PDB entries)
  2. Cytochrome c554 [48714] (1 species)
    contains 1 complete motif
  3. Dimeric di-heme split-soret cytochrome c [48716] (1 species)
  4. Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain [48721] (3 species)
    1. Species Shewanella frigidimarina [TaxId:56812] [48722] (16 PDB entries)
    2. Species Shewanella oneidensis [TaxId:70863] [74808] (4 PDB entries)
    3. Species Shewanella putrefaciens [TaxId:24] [48723] (3 PDB entries)
  5. Hydroxylamine oxidoreductase, HAO [48712] (1 species)
    contains 3 complete motifs
  6. Periplasmic nitrate reductase subunit NapB [74805] (2 species)
    1. Species Haemophilus influenzae [TaxId:727] [74806] (1 PDB entry)
    2. Species Rhodobacter sphaeroides [TaxId:1063] [101503] (1 PDB entry)
  7. Putative Cytochrome c [110040] (1 species)
  8. automated matches [190276] (12 species)
    not a true protein
    1. Species Desulfovibrio desulfuricans [311126] (1 PDB entry)
    2. Species Desulfovibrio vulgaris [TaxId:882] [187896] (2 PDB entries)
    3. Species Escherichia coli K-12 [TaxId:83333] [189512] (1 PDB entry)
    4. Species Escherichia coli [TaxId:562] [187218] (2 PDB entries)
    5. Species Escherichia coli [TaxId:83333] [269982] (1 PDB entry)
    6. Species Nitrosomonas europaea [TaxId:228410] [256253] (1 PDB entry)
    7. Species Nitrosomonas europaea [TaxId:915] [256367] (4 PDB entries)
    8. Species Shewanella algae [TaxId:38313] [375398] (1 PDB entry)
    9. Species Shewanella frigidimarina [TaxId:318167] [255317] (1 PDB entry)
    10. Species Shewanella oneidensis [TaxId:70863] [195500] (2 PDB entries)
    11. Species Wolinella succinogenes [TaxId:273121] [187068] (2 PDB entries)
    12. Species Wolinella succinogenes [TaxId:844] [187217] (4 PDB entries)

More info for Family a.138.1.3: Di-heme elbow motif

Timeline for Family a.138.1.3: Di-heme elbow motif: