Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1992366Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 1993175Superfamily a.29.5: alpha-ketoacid dehydrogenase kinase, N-terminal domain [69012] (2 families) (S)
    automatically mapped to Pfam PF10436
  5. 1993215Family a.29.5.0: automated matches [230678] (1 protein)
    not a true family
  6. 1993216Protein automated matches [230679] (2 species)
    not a true protein

Species:

  1. 1993217Human (Homo sapiens) [TaxId:9606] [230680] (8 PDB entries)
    1. Domains for 2e0a:
      1. 1993218Domain d2e0aa1: 2e0a A:20-187 [230683]
        Other proteins in same PDB: d2e0aa2, d2e0ab2
        automated match to d1jm6a1
        complexed with anp, mg
      2. 1993219Domain d2e0ab1: 2e0a B:20-187 [230681]
        Other proteins in same PDB: d2e0aa2, d2e0ab2
        automated match to d1jm6a1
        complexed with anp, mg
    2. Domain for 2q8f:
    3. Domain for 2q8g:
    4. Domain for 2q8h:
    5. Domains for 2zdx:
      1. 1993229Domain d2zdxa1: 2zdx A:20-187 [244908]
        Other proteins in same PDB: d2zdxa2, d2zdxb2
        automated match to d2e0ab1
        complexed with p4a
      2. 1993230Domain d2zdxb1: 2zdx B:20-187 [244910]
        Other proteins in same PDB: d2zdxa2, d2zdxb2
        automated match to d2e0ab1
        complexed with p4a
    6. Domains for 2zdy:
      1. 1993227Domain d2zdya1: 2zdy A:20-187 [244912]
        Other proteins in same PDB: d2zdya2, d2zdya3, d2zdyb2
        automated match to d2e0ab1
        complexed with adp, epe, mg
      2. 1993228Domain d2zdyb1: 2zdy B:21-187 [244914]
        Other proteins in same PDB: d2zdya2, d2zdya3, d2zdyb2
        automated match to d2e0ab1
        complexed with adp, epe, mg
    7. Domains for 2zkj:
      1. 1993222Domain d2zkja1: 2zkj A:20-180 [244949]
        Other proteins in same PDB: d2zkja2, d2zkjb2
        automated match to d2bu8a1
        complexed with adp, mg, po4
      2. 1993223Domain d2zkjb1: 2zkj B:20-180 [262242]
        Other proteins in same PDB: d2zkja2, d2zkjb2
        automated match to d2zkja1
        complexed with adp, mg, po4
    8. Domains for 3d2r:
      1. 1993224Domain d3d2ra1: 3d2r A:21-180 [245604]
        Other proteins in same PDB: d3d2ra2, d3d2rb2
        automated match to d2bu8a1
        complexed with adp, gol, mg
      2. 1993225Domain d3d2rb1: 3d2r B:20-180 [245606]
        Other proteins in same PDB: d3d2ra2, d3d2rb2
        automated match to d2bu8a1
        complexed with adp, gol, mg
  2. 1993231Norway rat (Rattus norvegicus) [TaxId:10116] [233753] (12 PDB entries)
    1. Domain for 3tz0:
    2. Domain for 3tz2:
    3. Domain for 3tz4:
    4. Domain for 3tz5:
    5. Domain for 3vad:
    6. Domain for 4dzy:
    7. Domain for 4e00:
    8. Domain for 4e01:
    9. Domain for 4e02:
    10. Domain for 4h7q:
    11. Domain for 4h81:
    12. Domain for 4h85:

More info for Protein automated matches from a.29.5.0: automated matches

Timeline for Protein automated matches from a.29.5.0: automated matches: