Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409668Fold b.115: Calcium-mediated lectin [82025] (1 superfamily)
    sandwich; 9 strands in 2 sheets; greek-key
  4. 2409669Superfamily b.115.1: Calcium-mediated lectin [82026] (2 families) (S)
  5. 2409670Family b.115.1.1: Calcium-mediated lectin [82027] (3 protein domains)
    automatically mapped to Pfam PF07472
  6. 2409716Protein automated matches [190094] (4 species)
    not a true protein

Species:

  1. 2409717Pseudomonas aeruginosa [TaxId:208963] [317649] (8 PDB entries)
    1. Domains for 5a6q:
      1. 2409746Domain d5a6qa_: 5a6q A: [317728]
        automated match to d4ut5a_
        complexed with ca, edo, gol
      2. 2409747Domain d5a6qb_: 5a6q B: [317678]
        automated match to d4ut5a_
        complexed with ca, edo, gol
      3. 2409748Domain d5a6qc_: 5a6q C: [317695]
        automated match to d4ut5a_
        complexed with ca, edo, gol
      4. 2409749Domain d5a6qd_: 5a6q D: [317651]
        automated match to d4ut5a_
        complexed with ca, edo, gol
    2. Domains for 5a6x:
      1. 2409730Domain d5a6xa_: 5a6x A: [317674]
        automated match to d4ut5a_
        complexed with ca, mfu
      2. 2409731Domain d5a6xb_: 5a6x B: [317698]
        automated match to d4ut5a_
        complexed with ca, mfu
      3. 2409732Domain d5a6xc_: 5a6x C: [317741]
        automated match to d4ut5a_
        complexed with ca, mfu
      4. 2409733Domain d5a6xd_: 5a6x D: [317671]
        automated match to d4ut5a_
        complexed with ca, mfu
    3. Domains for 5a6y:
      1. 2409718Domain d5a6ya_: 5a6y A: [317755]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
      2. 2409719Domain d5a6yb_: 5a6y B: [317680]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
      3. 2409720Domain d5a6yc_: 5a6y C: [317650]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
      4. 2409721Domain d5a6yd_: 5a6y D: [317692]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
    4. Domains for 5a6z:
      1. 2409726Domain d5a6za_: 5a6z A: [317705]
        automated match to d4ut5a_
        complexed with ca, peg, so4
      2. 2409727Domain d5a6zb_: 5a6z B: [317669]
        automated match to d4ut5a_
        complexed with ca, peg, so4
      3. 2409728Domain d5a6zc_: 5a6z C: [317722]
        automated match to d4ut5a_
        complexed with ca, peg, so4
      4. 2409729Domain d5a6zd_: 5a6z D: [317708]
        automated match to d4ut5a_
        complexed with ca, peg, so4
    5. Domains for 5a70:
      1. 2409734Domain d5a70a_: 5a70 A: [319959]
        automated match to d4ut5a_
        complexed with ca, so4
      2. 2409735Domain d5a70b_: 5a70 B: [319882]
        automated match to d4ut5a_
        complexed with ca, so4
      3. 2409736Domain d5a70c_: 5a70 C: [319880]
        automated match to d4ut5a_
        complexed with ca, so4
      4. 2409737Domain d5a70d_: 5a70 D: [319881]
        automated match to d4ut5a_
        complexed with ca, so4
    6. Domains for 5may:
      1. 2409738Domain d5maya_: 5may A: [343010]
        automated match to d4ut5a_
        complexed with ca, ful, pk6
      2. 2409739Domain d5mayb_: 5may B: [343016]
        automated match to d4ut5a_
        complexed with ca, ful, pk6
      3. 2409740Domain d5mayc_: 5may C: [343014]
        automated match to d4ut5a_
        complexed with ca, ful, pk6
      4. 2409741Domain d5mayd_: 5may D: [343019]
        automated match to d4ut5a_
        complexed with ca, ful, pk6
    7. Domains for 5maz:
      1. 2409722Domain d5maza_: 5maz A: [343017]
        automated match to d4ut5a_
        complexed with ca, edo, ful, gol, igf
      2. 2409723Domain d5mazb_: 5maz B: [343044]
        automated match to d4ut5a_
        complexed with ca, edo, ful, gol, igf
      3. 2409724Domain d5mazc_: 5maz C: [343026]
        automated match to d4ut5a_
        complexed with ca, edo, ful, gol, igf
      4. 2409725Domain d5mazd_: 5maz D: [343003]
        automated match to d4ut5a_
        complexed with ca, edo, ful, gol, igf
    8. Domains for 5mb1:
      1. 2409742Domain d5mb1a_: 5mb1 A: [343042]
        automated match to d4ut5a_
        complexed with 7kt, ca, flc, ful
      2. 2409743Domain d5mb1b_: 5mb1 B: [343002]
        automated match to d4ut5a_
        complexed with 7kt, ca, flc, ful
      3. 2409744Domain d5mb1c_: 5mb1 C: [343063]
        automated match to d4ut5a_
        complexed with 7kt, ca, flc, ful
      4. 2409745Domain d5mb1d_: 5mb1 D: [343030]
        automated match to d4ut5a_
        complexed with 7kt, ca, flc, ful
  2. 2409750Pseudomonas aeruginosa [TaxId:287] [186815] (12 PDB entries)
    1. Domains for 1w8f:
      1. 2409751Domain d1w8fa_: 1w8f A: [120722]
        automated match to d1gzta_
        complexed with ca, gol, so4
      2. 2409752Domain d1w8fb_: 1w8f B: [120723]
        automated match to d1gzta_
        complexed with ca, gol, so4
      3. 2409753Domain d1w8fc_: 1w8f C: [120724]
        automated match to d1gzta_
        complexed with ca, gol, so4
      4. 2409754Domain d1w8fd_: 1w8f D: [120725]
        automated match to d1gzta_
        complexed with ca, gol, so4
    2. Domains for 1w8h:
      1. 2409779Domain d1w8ha_: 1w8h A: [120726]
        automated match to d1gzta_
        complexed with ca, gol, so4
      2. 2409780Domain d1w8hb_: 1w8h B: [120727]
        automated match to d1gzta_
        complexed with ca, gol, so4
      3. 2409781Domain d1w8hc_: 1w8h C: [120728]
        automated match to d1gzta_
        complexed with ca, gol, so4
      4. 2409782Domain d1w8hd_: 1w8h D: [120729]
        automated match to d1gzta_
        complexed with ca, gol, so4
    3. Domains for 2jdh:
      1. 2409759Domain d2jdha_: 2jdh A: [147979]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
      2. 2409760Domain d2jdhb_: 2jdh B: [147980]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
      3. 2409761Domain d2jdhc_: 2jdh C: [147981]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
      4. 2409762Domain d2jdhd_: 2jdh D: [147982]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
    4. Domains for 2jdk:
      1. 2409755Domain d2jdka_: 2jdk A: [147983]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
      2. 2409756Domain d2jdkb_: 2jdk B: [147984]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
      3. 2409757Domain d2jdkc_: 2jdk C: [147985]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
      4. 2409758Domain d2jdkd_: 2jdk D: [147986]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
    5. Domains for 2jdm:
      1. 2409787Domain d2jdma_: 2jdm A: [166119]
        automated match to d1gzta_
        complexed with ca, fuc, mfu, so4; mutant
      2. 2409788Domain d2jdmb_: 2jdm B: [166120]
        automated match to d1gzta_
        complexed with ca, fuc, mfu, so4; mutant
      3. 2409789Domain d2jdmc_: 2jdm C: [166121]
        automated match to d1oxca_
        complexed with ca, fuc, mfu, so4; mutant
      4. 2409790Domain d2jdmd_: 2jdm D: [166122]
        automated match to d1gzta_
        complexed with ca, fuc, mfu, so4; mutant
    6. Domains for 2jdn:
      1. 2409763Domain d2jdna_: 2jdn A: [166123]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
      2. 2409764Domain d2jdnb_: 2jdn B: [166124]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
      3. 2409765Domain d2jdnc_: 2jdn C: [166125]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
      4. 2409766Domain d2jdnd_: 2jdn D: [166126]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
    7. Domains for 2jdp:
      1. 2409767Domain d2jdpa_: 2jdp A: [166127]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
      2. 2409768Domain d2jdpb_: 2jdp B: [166128]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
      3. 2409769Domain d2jdpc_: 2jdp C: [166129]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
      4. 2409770Domain d2jdpd_: 2jdp D: [166130]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
    8. Domains for 2jdu:
      1. 2409771Domain d2jdua_: 2jdu A: [166132]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
      2. 2409772Domain d2jdub_: 2jdu B: [166133]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
      3. 2409773Domain d2jduc_: 2jdu C: [166134]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
      4. 2409774Domain d2jdud_: 2jdu D: [166135]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
    9. Domains for 2jdy:
      1. 2409775Domain d2jdya_: 2jdy A: [166137]
        automated match to d1gzta_
        complexed with ca, mma; mutant
      2. 2409776Domain d2jdyb_: 2jdy B: [166138]
        automated match to d1gzta_
        complexed with ca, mma; mutant
      3. 2409777Domain d2jdyc_: 2jdy C: [166139]
        automated match to d1gzta_
        complexed with ca, mma; mutant
      4. 2409778Domain d2jdyd_: 2jdy D: [166140]
        automated match to d1gzta_
        complexed with ca, mma; mutant
    10. Domains for 2vuc:
      1. 2409783Domain d2vuca_: 2vuc A: [168828]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
      2. 2409784Domain d2vucb_: 2vuc B: [168829]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
      3. 2409785Domain d2vucc_: 2vuc C: [168830]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
      4. 2409786Domain d2vucd_: 2vuc D: [168831]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
    11. Domains for 2vud:
      1. 2409791Domain d2vuda_: 2vud A: [168832]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
      2. 2409792Domain d2vudb_: 2vud B: [168833]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
      3. 2409793Domain d2vudc_: 2vud C: [168834]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
      4. 2409794Domain d2vudd_: 2vud D: [168835]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
    12. Domains for 3dcq:
      1. 2409795Domain d3dcqa_: 3dcq A: [173817]
        automated match to d1gzta_
        complexed with 2g0, ca
      2. 2409796Domain d3dcqb_: 3dcq B: [173818]
        automated match to d1gzta_
        complexed with 2g0, ca
      3. 2409797Domain d3dcqc_: 3dcq C: [173819]
        automated match to d1gzta_
        complexed with 2g0, ca
      4. 2409798Domain d3dcqd_: 3dcq D: [173820]
        automated match to d1gzta_
        complexed with 2g0, ca
  3. 2409799Pseudomonas aeruginosa [TaxId:381754] [275279] (1 PDB entry)
  4. 2409804Pseudomonas aeruginosa, PA01 [TaxId:208964] [186987] (2 PDB entries)
    1. Domains for 2boj:
      1. 2409809Domain d2boja_: 2boj A: [128912]
        automated match to d1gzta_
        complexed with arw, ca, so4
      2. 2409810Domain d2bojb_: 2boj B: [128913]
        automated match to d1gzta_
        complexed with arw, ca, so4
      3. 2409811Domain d2bojc_: 2boj C: [128914]
        automated match to d1gzta_
        complexed with arw, ca, so4
      4. 2409812Domain d2bojd_: 2boj D: [128915]
        automated match to d1gzta_
        complexed with arw, ca, so4
    2. Domains for 2bp6:
      1. 2409805Domain d2bp6a_: 2bp6 A: [128922]
        automated match to d1gzta_
        complexed with ca, gxl, so4
      2. 2409806Domain d2bp6b_: 2bp6 B: [128923]
        automated match to d1gzta_
        complexed with ca, gxl, so4
      3. 2409807Domain d2bp6c_: 2bp6 C: [128924]
        automated match to d1gzta_
        complexed with ca, gxl, so4
      4. 2409808Domain d2bp6d_: 2bp6 D: [128925]
        automated match to d1gzta_
        complexed with ca, gxl, so4

More info for Protein automated matches from b.115.1.1: Calcium-mediated lectin

Timeline for Protein automated matches from b.115.1.1: Calcium-mediated lectin: