Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075234Fold b.115: Calcium-mediated lectin [82025] (1 superfamily)
    sandwich; 9 strands in 2 sheets; greek-key
  4. 2075235Superfamily b.115.1: Calcium-mediated lectin [82026] (2 families) (S)
  5. 2075236Family b.115.1.1: Calcium-mediated lectin [82027] (3 protein domains)
    automatically mapped to Pfam PF07472
  6. 2075282Protein automated matches [190094] (4 species)
    not a true protein

Species:

  1. 2075283Pseudomonas aeruginosa [TaxId:287] [186815] (12 PDB entries)
    1. Domains for 1w8f:
      1. 2075284Domain d1w8fa_: 1w8f A: [120722]
        automated match to d1gzta_
        complexed with ca, gol, so4
      2. 2075285Domain d1w8fb_: 1w8f B: [120723]
        automated match to d1gzta_
        complexed with ca, gol, so4
      3. 2075286Domain d1w8fc_: 1w8f C: [120724]
        automated match to d1gzta_
        complexed with ca, gol, so4
      4. 2075287Domain d1w8fd_: 1w8f D: [120725]
        automated match to d1gzta_
        complexed with ca, gol, so4
    2. Domains for 1w8h:
      1. 2075316Domain d1w8ha_: 1w8h A: [120726]
        automated match to d1gzta_
        complexed with ca, gol, so4
      2. 2075317Domain d1w8hb_: 1w8h B: [120727]
        automated match to d1gzta_
        complexed with ca, gol, so4
      3. 2075318Domain d1w8hc_: 1w8h C: [120728]
        automated match to d1gzta_
        complexed with ca, gol, so4
      4. 2075319Domain d1w8hd_: 1w8h D: [120729]
        automated match to d1gzta_
        complexed with ca, gol, so4
    3. Domains for 2jdh:
      1. 2075292Domain d2jdha_: 2jdh A: [147979]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
      2. 2075293Domain d2jdhb_: 2jdh B: [147980]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
      3. 2075294Domain d2jdhc_: 2jdh C: [147981]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
      4. 2075295Domain d2jdhd_: 2jdh D: [147982]
        automated match to d1gzta_
        complexed with ca, fuc, so4, ta5
    4. Domains for 2jdk:
      1. 2075288Domain d2jdka_: 2jdk A: [147983]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
      2. 2075289Domain d2jdkb_: 2jdk B: [147984]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
      3. 2075290Domain d2jdkc_: 2jdk C: [147985]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
      4. 2075291Domain d2jdkd_: 2jdk D: [147986]
        automated match to d1gzta_
        complexed with ca, fuc, so4, t45
    5. Domains for 2jdm:
      1. 2075320Domain d2jdma_: 2jdm A: [166119]
        automated match to d1gzta_
        complexed with ca, fuc, mfu, so4; mutant
      2. 2075321Domain d2jdmb_: 2jdm B: [166120]
        automated match to d1gzta_
        complexed with ca, fuc, mfu, so4; mutant
      3. 2075322Domain d2jdmc_: 2jdm C: [166121]
        automated match to d1oxca_
        complexed with ca, fuc, mfu, so4; mutant
      4. 2075323Domain d2jdmd_: 2jdm D: [166122]
        automated match to d1gzta_
        complexed with ca, fuc, mfu, so4; mutant
    6. Domains for 2jdn:
      1. 2075300Domain d2jdna_: 2jdn A: [166123]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
      2. 2075301Domain d2jdnb_: 2jdn B: [166124]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
      3. 2075302Domain d2jdnc_: 2jdn C: [166125]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
      4. 2075303Domain d2jdnd_: 2jdn D: [166126]
        automated match to d1gzta_
        complexed with ca, fuc, mma, so4; mutant
    7. Domains for 2jdp:
      1. 2075304Domain d2jdpa_: 2jdp A: [166127]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
      2. 2075305Domain d2jdpb_: 2jdp B: [166128]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
      3. 2075306Domain d2jdpc_: 2jdp C: [166129]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
      4. 2075307Domain d2jdpd_: 2jdp D: [166130]
        automated match to d1gzta_
        complexed with ca, mfu; mutant
    8. Domains for 2jdu:
      1. 2075308Domain d2jdua_: 2jdu A: [166132]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
      2. 2075309Domain d2jdub_: 2jdu B: [166133]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
      3. 2075310Domain d2jduc_: 2jdu C: [166134]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
      4. 2075311Domain d2jdud_: 2jdu D: [166135]
        automated match to d1gzta_
        complexed with ca, gol, mfu, so4; mutant
    9. Domains for 2jdy:
      1. 2075312Domain d2jdya_: 2jdy A: [166137]
        automated match to d1gzta_
        complexed with ca, mma; mutant
      2. 2075313Domain d2jdyb_: 2jdy B: [166138]
        automated match to d1gzta_
        complexed with ca, mma; mutant
      3. 2075314Domain d2jdyc_: 2jdy C: [166139]
        automated match to d1gzta_
        complexed with ca, mma; mutant
      4. 2075315Domain d2jdyd_: 2jdy D: [166140]
        automated match to d1gzta_
        complexed with ca, mma; mutant
    10. Domains for 2vuc:
      1. 2075296Domain d2vuca_: 2vuc A: [168828]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
      2. 2075297Domain d2vucb_: 2vuc B: [168829]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
      3. 2075298Domain d2vucc_: 2vuc C: [168830]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
      4. 2075299Domain d2vucd_: 2vuc D: [168831]
        automated match to d1gzta_
        complexed with ca, fuc, so4, yx0
    11. Domains for 2vud:
      1. 2075324Domain d2vuda_: 2vud A: [168832]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
      2. 2075325Domain d2vudb_: 2vud B: [168833]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
      3. 2075326Domain d2vudc_: 2vud C: [168834]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
      4. 2075327Domain d2vudd_: 2vud D: [168835]
        automated match to d1gzta_
        complexed with ca, fuc, lz0, so4
    12. Domains for 3dcq:
      1. 2075328Domain d3dcqa_: 3dcq A: [173817]
        automated match to d1gzta_
        complexed with 2g0, ca
      2. 2075329Domain d3dcqb_: 3dcq B: [173818]
        automated match to d1gzta_
        complexed with 2g0, ca
      3. 2075330Domain d3dcqc_: 3dcq C: [173819]
        automated match to d1gzta_
        complexed with 2g0, ca
      4. 2075331Domain d3dcqd_: 3dcq D: [173820]
        automated match to d1gzta_
        complexed with 2g0, ca
  2. 2075332Pseudomonas aeruginosa [TaxId:381754] [275279] (1 PDB entry)
  3. 2075337Pseudomonas aeruginosa, PA01 [TaxId:208964] [186987] (2 PDB entries)
    1. Domains for 2boj:
      1. 2075342Domain d2boja_: 2boj A: [128912]
        automated match to d1gzta_
        complexed with arw, ca, so4
      2. 2075343Domain d2bojb_: 2boj B: [128913]
        automated match to d1gzta_
        complexed with arw, ca, so4
      3. 2075344Domain d2bojc_: 2boj C: [128914]
        automated match to d1gzta_
        complexed with arw, ca, so4
      4. 2075345Domain d2bojd_: 2boj D: [128915]
        automated match to d1gzta_
        complexed with arw, ca, so4
    2. Domains for 2bp6:
      1. 2075338Domain d2bp6a_: 2bp6 A: [128922]
        automated match to d1gzta_
        complexed with ca, gxl, so4
      2. 2075339Domain d2bp6b_: 2bp6 B: [128923]
        automated match to d1gzta_
        complexed with ca, gxl, so4
      3. 2075340Domain d2bp6c_: 2bp6 C: [128924]
        automated match to d1gzta_
        complexed with ca, gxl, so4
      4. 2075341Domain d2bp6d_: 2bp6 D: [128925]
        automated match to d1gzta_
        complexed with ca, gxl, so4
  4. 2274348Pseudomonas aeruginosa [TaxId:208963] [317649] (5 PDB entries)
    1. Domains for 5a6q:
      1. 2274350Domain d5a6qd_: 5a6q D: [317651]
        automated match to d4ut5a_
        complexed with ca, edo, gol
      2. 2274377Domain d5a6qb_: 5a6q B: [317678]
        automated match to d4ut5a_
        complexed with ca, edo, gol
      3. 2274394Domain d5a6qc_: 5a6q C: [317695]
        automated match to d4ut5a_
        complexed with ca, edo, gol
      4. 2274427Domain d5a6qa_: 5a6q A: [317728]
        automated match to d4ut5a_
        complexed with ca, edo, gol
    2. Domains for 5a6x:
      1. 2274370Domain d5a6xd_: 5a6x D: [317671]
        automated match to d4ut5a_
        complexed with ca, mfu
      2. 2274373Domain d5a6xa_: 5a6x A: [317674]
        automated match to d4ut5a_
        complexed with ca, mfu
      3. 2274397Domain d5a6xb_: 5a6x B: [317698]
        automated match to d4ut5a_
        complexed with ca, mfu
      4. 2274440Domain d5a6xc_: 5a6x C: [317741]
        automated match to d4ut5a_
        complexed with ca, mfu
    3. Domains for 5a6y:
      1. 2274349Domain d5a6yc_: 5a6y C: [317650]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
      2. 2274379Domain d5a6yb_: 5a6y B: [317680]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
      3. 2274391Domain d5a6yd_: 5a6y D: [317692]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
      4. 2274454Domain d5a6ya_: 5a6y A: [317755]
        automated match to d4ut5a_
        complexed with ca, gol, man, so4
    4. Domains for 5a6z:
      1. 2274368Domain d5a6zb_: 5a6z B: [317669]
        automated match to d4ut5a_
        complexed with ca, peg, so4
      2. 2274404Domain d5a6za_: 5a6z A: [317705]
        automated match to d4ut5a_
        complexed with ca, peg, so4
      3. 2274407Domain d5a6zd_: 5a6z D: [317708]
        automated match to d4ut5a_
        complexed with ca, peg, so4
      4. 2274421Domain d5a6zc_: 5a6z C: [317722]
        automated match to d4ut5a_
        complexed with ca, peg, so4
    5. Domains for 5a70:
      1. 2276579Domain d5a70c_: 5a70 C: [319880]
        automated match to d4ut5a_
        complexed with ca, so4
      2. 2276580Domain d5a70d_: 5a70 D: [319881]
        automated match to d4ut5a_
        complexed with ca, so4
      3. 2276581Domain d5a70b_: 5a70 B: [319882]
        automated match to d4ut5a_
        complexed with ca, so4
      4. 2276658Domain d5a70a_: 5a70 A: [319959]
        automated match to d4ut5a_
        complexed with ca, so4

More info for Protein automated matches from b.115.1.1: Calcium-mediated lectin

Timeline for Protein automated matches from b.115.1.1: Calcium-mediated lectin: