PDB entry 2jdh

View 2jdh on RCSB PDB site
Description: Lectin PA-IIL of P.aeruginosa complexed with disaccharide derivative
Class: sugar binding protein
Keywords: lectin, cystic fibrosis, sugar binding protein
Deposited on 2007-01-09, released 2007-07-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.1 Å
R-factor: N/A
AEROSPACI score: 0.81 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fucose-binding lectin PA-IIL
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jdha_
  • Chain 'B':
    Compound: Fucose-binding lectin PA-IIL
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jdhb_
  • Chain 'C':
    Compound: Fucose-binding lectin PA-IIL
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jdhc_
  • Chain 'D':
    Compound: Fucose-binding lectin PA-IIL
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2jdhd_
  • Heterogens: FUC, CA, TA5, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2jdhA (A:)
matqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgs
sgkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

    Sequence, based on observed residues (ATOM records): (download) 
    >2jdhA (A:)
atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2jdhB (B:)
matqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgs
sgkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

    Sequence, based on observed residues (ATOM records): (download) 
    >2jdhB (B:)
atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2jdhC (C:)
matqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgs
sgkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

    Sequence, based on observed residues (ATOM records): (download) 
    >2jdhC (C:)
atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2jdhD (D:)
matqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgs
sgkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg

    Sequence, based on observed residues (ATOM records): (download) 
    >2jdhD (D:)
atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg