Lineage for Species: SARS coronavirus [TaxId: 227859]

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 802045Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 802046Superfamily b.47.1: Trypsin-like serine proteases [50494] (4 families) (S)
  5. 803590Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (3 proteins)
  6. 803620Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (3 species)
    contains an extra alpha-helical domain
  7. 803624Species SARS coronavirus [TaxId:227859] [89349] (20 PDB entries)

PDB entries in Species: SARS coronavirus [TaxId: 227859]:

  1. Domain(s) for 1q2w:
    1. 803635Domain d1q2wa_: 1q2w A: [88355]
    2. 803636Domain d1q2wb_: 1q2w B: [88356]
      complexed with mpd
  2. Domain(s) for 1uj1:
    1. 803639Domain d1uj1a_: 1uj1 A: [99450]
    2. 803640Domain d1uj1b_: 1uj1 B: [99451]
  3. Domain(s) for 1uk2:
    1. 803649Domain d1uk2a_: 1uk2 A: [99481]
    2. 803650Domain d1uk2b_: 1uk2 B: [99482]
  4. Domain(s) for 1uk3:
    1. 803651Domain d1uk3a_: 1uk3 A: [99483]
    2. 803652Domain d1uk3b_: 1uk3 B: [99484]
  5. Domain(s) for 1uk4:
    1. 803653Domain d1uk4a_: 1uk4 A: [99485]
    2. 803654Domain d1uk4b_: 1uk4 B: [99486]
      complexed with ato
  6. Domain(s) for 2alv:
  7. Domain(s) for 2duc:
    1. 803625Domain d2duca1: 2duc A:2-301 [146586]
      automatically matched to d1q2wb_
    2. 803626Domain d2ducb1: 2duc B:2-301 [146587]
      automatically matched to d1q2wb_
  8. Domain(s) for 2op9:
    1. 803629Domain d2op9a1: 2op9 A:2-301 [148961]
      automatically matched to d1q2wb_
      complexed with wr1
    2. 803630Domain d2op9b1: 2op9 B:2-301 [148962]
      automatically matched to d1q2wb_
      complexed with wr1
  9. Domain(s) for 2qiq:
  10. Domain(s) for 2v6n:
  11. Domain(s) for 2vj1:
    1. 803646Domain d2vj1a1: 2vj1 A:2-301 [153178]
      automatically matched to d1q2wb_
      complexed with bez, dms, xp1
    2. 803647Domain d2vj1b1: 2vj1 B:2-301 [153179]
      automatically matched to d1q2wb_
      complexed with bez, dms, xp1
  12. Domain(s) for 2z3c:
  13. Domain(s) for 2z3d:
  14. Domain(s) for 2z3e:
  15. Domain(s) for 2z94:
  16. Domain(s) for 2z9g:
  17. Domain(s) for 2z9j:
    1. 803637Domain d2z9ja1: 2z9j A:2-301 [154254]
      automatically matched to d1q2wb_
      complexed with dms, dtz
    2. 803638Domain d2z9jb1: 2z9j B:2-301 [154255]
      automatically matched to d1q2wb_
      complexed with dms, dtz
  18. Domain(s) for 2z9k:
    1. 803632Domain d2z9ka1: 2z9k A:2-301 [154256]
      automatically matched to d1q2wb_
      complexed with dms, doz
    2. 803633Domain d2z9kb1: 2z9k B:2-301 [154257]
      automatically matched to d1q2wb_
      complexed with dms, doz
  19. Domain(s) for 2z9l:
    1. 803642Domain d2z9la1: 2z9l A:2-301 [154258]
      automatically matched to d1q2wb_
      complexed with daz, dms
    2. 803643Domain d2z9lb1: 2z9l B:2-301 [154259]
      automatically matched to d1q2wb_
      complexed with daz, dms
  20. Domain(s) for 3d62:

More info for Species SARS coronavirus [TaxId:227859] from b.47.1.4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2)

Timeline for Species SARS coronavirus [TaxId:227859] from b.47.1.4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2):