Lineage for Protein: RNase III, C-terminal domain

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2170232Fold d.50: dsRBD-like [54767] (5 superfamilies)
    alpha-beta(3)-alpha; 2 layers: alpha/beta
  4. 2170233Superfamily d.50.1: dsRNA-binding domain-like [54768] (4 families) (S)
  5. 2170234Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD) [54769] (13 protein domains)
    Pfam PF00035
  6. 2170261Protein RNase III, C-terminal domain [54776] (3 species)

Species:

  1. 2170262Aquifex aeolicus [TaxId:63363] [102927] (9 PDB entries)
    1. Domain for 1rc7:
    2. Domains for 1yyk:
      1. 2170272Domain d1yyka2: 1yyk A:151-221 [124219]
        Other proteins in same PDB: d1yyka1, d1yykb1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs
      2. 2170273Domain d1yykb2: 1yyk B:151-221 [124221]
        Other proteins in same PDB: d1yyka1, d1yykb1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs
    3. Domains for 1yyo:
      1. 2170274Domain d1yyoa2: 1yyo A:151-220 [124245]
        Other proteins in same PDB: d1yyoa1, d1yyob1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs; mutant
      2. 2170275Domain d1yyob2: 1yyo B:151-220 [124247]
        Other proteins in same PDB: d1yyoa1, d1yyob1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs; mutant
    4. Domains for 1yyw:
      1. 2170278Domain d1yywa2: 1yyw A:151-220 [124257]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
      2. 2170279Domain d1yywb2: 1yyw B:151-220 [124259]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
      3. 2170280Domain d1yywc2: 1yyw C:151-219 [124261]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
      4. 2170281Domain d1yywd2: 1yyw D:151-220 [124263]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
    5. Domains for 1yz9:
      1. 2170268Domain d1yz9a2: 1yz9 A:151-220 [124272]
        Other proteins in same PDB: d1yz9a1, d1yz9b1
        automated match to d2nugb2
        protein/RNA complex; complexed with so4; mutant
      2. 2170269Domain d1yz9b2: 1yz9 B:151-220 [124274]
        Other proteins in same PDB: d1yz9a1, d1yz9b1
        automated match to d2nugb2
        protein/RNA complex; complexed with so4; mutant
    6. Domains for 2ez6:
      1. 2170265Domain d2ez6a2: 2ez6 A:151-220 [132617]
        Other proteins in same PDB: d2ez6a1, d2ez6b1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
      2. 2170266Domain d2ez6b2: 2ez6 B:151-220 [132619]
        Other proteins in same PDB: d2ez6a1, d2ez6b1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
    7. Domains for 2nue:
      1. 2170276Domain d2nuea2: 2nue A:151-221 [148445]
        Other proteins in same PDB: d2nuea1, d2nueb1
        automated match to d2nugb2
        protein/RNA complex
      2. 2170277Domain d2nueb2: 2nue B:151-220 [148447]
        Other proteins in same PDB: d2nuea1, d2nueb1
        automated match to d2nugb2
        protein/RNA complex
    8. Domains for 2nuf:
      1. 2170270Domain d2nufa2: 2nuf A:151-220 [148449]
        Other proteins in same PDB: d2nufa1, d2nufb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
      2. 2170271Domain d2nufb2: 2nuf B:151-220 [148451]
        Other proteins in same PDB: d2nufa1, d2nufb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
    9. Domains for 2nug:
      1. 2170263Domain d2nuga2: 2nug A:151-218 [148453]
        Other proteins in same PDB: d2nuga1, d2nugb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
      2. 2170264Domain d2nugb2: 2nug B:151-220 [148455]
        Other proteins in same PDB: d2nuga1, d2nugb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
  2. 2170282Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110913] (3 PDB entries)
    Uniprot Q02555 364-447 ! Uniprot Q02555 366-453 ! Uniprot Q02555 363-443
    1. Domain for 1t4l:
    2. Domain for 1t4n:
    3. Domains for 1t4o:
      1. 2170283Domain d1t4oa_: 1t4o A: [106425]
      2. 2170284Domain d1t4ob_: 1t4o B: [106426]
  3. 2170287Thermotoga maritima [TaxId:2336] [82644] (1 PDB entry)

More info for Protein RNase III, C-terminal domain from d.50.1.1: Double-stranded RNA-binding domain (dsRBD)

Timeline for Protein RNase III, C-terminal domain from d.50.1.1: Double-stranded RNA-binding domain (dsRBD):