Lineage for Protein: RNase III, C-terminal domain

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2553728Fold d.50: dsRBD-like [54767] (5 superfamilies)
    alpha-beta(3)-alpha; 2 layers: alpha/beta
  4. 2553729Superfamily d.50.1: dsRNA-binding domain-like [54768] (4 families) (S)
  5. 2553730Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD) [54769] (13 proteins)
    Pfam PF00035
  6. 2553757Protein RNase III, C-terminal domain [54776] (3 species)

Species:

  1. 2553758Aquifex aeolicus [TaxId:63363] [102927] (9 PDB entries)
    1. Domain for 1rc7:
    2. Domains for 1yyk:
      1. 2553766Domain d1yyka2: 1yyk A:151-221 [124219]
        Other proteins in same PDB: d1yyka1, d1yykb1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs
      2. 2553767Domain d1yykb2: 1yyk B:151-221 [124221]
        Other proteins in same PDB: d1yyka1, d1yykb1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs
    3. Domains for 1yyo:
      1. 2553768Domain d1yyoa2: 1yyo A:151-220 [124245]
        Other proteins in same PDB: d1yyoa1, d1yyob1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs; mutant
      2. 2553769Domain d1yyob2: 1yyo B:151-220 [124247]
        Other proteins in same PDB: d1yyoa1, d1yyob1
        automated match to d2nugb2
        protein/RNA complex; complexed with trs; mutant
    4. Domains for 1yyw:
      1. 2553772Domain d1yywa2: 1yyw A:151-220 [124257]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
      2. 2553773Domain d1yywb2: 1yyw B:151-220 [124259]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
      3. 2553774Domain d1yywc2: 1yyw C:151-219 [124261]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
      4. 2553775Domain d1yywd2: 1yyw D:151-220 [124263]
        Other proteins in same PDB: d1yywa1, d1yywb1, d1yywc1, d1yywd1
        automated match to d2nugb2
        protein/RNA complex
    5. Domains for 1yz9:
      1. 2553764Domain d1yz9a2: 1yz9 A:151-220 [124272]
        Other proteins in same PDB: d1yz9a1, d1yz9b1
        automated match to d2nugb2
        protein/RNA complex; complexed with so4; mutant
      2. 2553765Domain d1yz9b2: 1yz9 B:151-220 [124274]
        Other proteins in same PDB: d1yz9a1, d1yz9b1
        automated match to d2nugb2
        protein/RNA complex; complexed with so4; mutant
    6. Domains for 2ez6:
      1. 2553759Domain d2ez6a2: 2ez6 A:151-220 [132617]
        Other proteins in same PDB: d2ez6a1, d2ez6b1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
      2. 2553760Domain d2ez6b2: 2ez6 B:151-220 [132619]
        Other proteins in same PDB: d2ez6a1, d2ez6b1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
    7. Domains for 2nue:
      1. 2553776Domain d2nuea2: 2nue A:151-221 [148445]
        Other proteins in same PDB: d2nuea1, d2nueb1
        automated match to d2nugb2
        protein/RNA complex
      2. 2553777Domain d2nueb2: 2nue B:151-220 [148447]
        Other proteins in same PDB: d2nuea1, d2nueb1
        automated match to d2nugb2
        protein/RNA complex
    8. Domains for 2nuf:
      1. 2553770Domain d2nufa2: 2nuf A:151-220 [148449]
        Other proteins in same PDB: d2nufa1, d2nufb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
      2. 2553771Domain d2nufb2: 2nuf B:151-220 [148451]
        Other proteins in same PDB: d2nufa1, d2nufb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
    9. Domains for 2nug:
      1. 2553762Domain d2nuga2: 2nug A:151-218 [148453]
        Other proteins in same PDB: d2nuga1, d2nugb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
      2. 2553763Domain d2nugb2: 2nug B:151-220 [148455]
        Other proteins in same PDB: d2nuga1, d2nugb1
        automated match to d2nugb2
        protein/RNA complex; complexed with mg
  2. 2553778Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110913] (3 PDB entries)
    Uniprot Q02555 364-447 ! Uniprot Q02555 366-453 ! Uniprot Q02555 363-443
    1. Domain for 1t4l:
    2. Domain for 1t4n:
    3. Domains for 1t4o:
      1. 2553779Domain d1t4oa_: 1t4o A: [106425]
      2. 2553780Domain d1t4ob_: 1t4o B: [106426]
  3. 2553783Thermotoga maritima [TaxId:2336] [82644] (1 PDB entry)

More info for Protein RNase III, C-terminal domain from d.50.1.1: Double-stranded RNA-binding domain (dsRBD)

Timeline for Protein RNase III, C-terminal domain from d.50.1.1: Double-stranded RNA-binding domain (dsRBD):