Lineage for Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2170232Fold d.50: dsRBD-like [54767] (5 superfamilies)
    alpha-beta(3)-alpha; 2 layers: alpha/beta
  4. 2170233Superfamily d.50.1: dsRNA-binding domain-like [54768] (4 families) (S)
  5. 2170234Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD) [54769] (13 protein domains)
    Pfam PF00035

Protein Domains:

  1. 2170235ATP-dependent RNA helicase A, Dhx9 [117901] (1 species)
    formerly hypothetical protein bab28848
  2. 2170239Dgcr8 protein [143206] (1 species)
  3. 2170242Double-stranded RNA-binding protein A, second dsRBD [54770] (1 species)
  4. 2170246dsRNA-dependent protein kinase pkr [54774] (2 species)
    contains tandem repeat of two dsRBD
    1. 2170247Species Human (Homo sapiens) [TaxId:9606] [54775] (1 PDB entry)
    2. 2170250Species Mouse (Mus musculus) [TaxId:10090] [143201] (2 PDB entries)
      Uniprot Q03963 1-85! Uniprot Q03963 96-181
  5. 2170253dsRNA-specific editase 1 [143202] (1 species)
    duplication: contains two dsRBD domains
  6. 2170258Interferon-inducible double stranded RNA-dependent protein kinase activator A [143204] (1 species)
  7. 2170261RNase III, C-terminal domain [54776] (3 species)
    1. 2170262Species Aquifex aeolicus [TaxId:63363] [102927] (9 PDB entries)
    2. 2170282Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110913] (3 PDB entries)
      Uniprot Q02555 364-447 ! Uniprot Q02555 366-453 ! Uniprot Q02555 363-443
    3. 2170287Species Thermotoga maritima [TaxId:2336] [82644] (1 PDB entry)
  8. 2170290Spermatid perinuclear RNA-binding protein [143210] (1 species)
  9. 2170293staufen homolog 2 [110914] (1 species)
  10. 2170296Staufen, domain III [54772] (1 species)
  11. 2170300TAR RNA-binding protein 2 [143208] (1 species)
    duplication: contains three dsRBD
  12. 2170303tRNA-dihydrouridine synthase 2-like, Dus2l (2310016k04Rik) [117903] (1 species)
  13. 2170306automated matches [191157] (3 species)
    not a true protein
    1. 2170307Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255423] (1 PDB entry)
    2. 2170309Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [255462] (2 PDB entries)
    3. 2170312Species Human (Homo sapiens) [TaxId:9606] [189334] (1 PDB entry)

More info for Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD)

Timeline for Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD):