Lineage for Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2514439Fold d.50: dsRBD-like [54767] (5 superfamilies)
    alpha-beta(3)-alpha; 2 layers: alpha/beta
  4. 2514440Superfamily d.50.1: dsRNA-binding domain-like [54768] (4 families) (S)
  5. 2514441Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD) [54769] (13 protein domains)
    Pfam PF00035

Protein Domains:

  1. 2514442ATP-dependent RNA helicase A, Dhx9 [117901] (1 species)
    formerly hypothetical protein bab28848
  2. 2514446Dgcr8 protein [143206] (1 species)
  3. 2514449Double-stranded RNA-binding protein A, second dsRBD [54770] (1 species)
  4. 2514453dsRNA-dependent protein kinase pkr [54774] (2 species)
    contains tandem repeat of two dsRBD
    1. 2514454Species Human (Homo sapiens) [TaxId:9606] [54775] (1 PDB entry)
    2. 2514457Species Mouse (Mus musculus) [TaxId:10090] [143201] (2 PDB entries)
      Uniprot Q03963 1-85! Uniprot Q03963 96-181
  5. 2514460dsRNA-specific editase 1 [143202] (1 species)
    duplication: contains two dsRBD domains
  6. 2514465Interferon-inducible double stranded RNA-dependent protein kinase activator A [143204] (1 species)
  7. 2514468RNase III, C-terminal domain [54776] (3 species)
    1. 2514469Species Aquifex aeolicus [TaxId:63363] [102927] (9 PDB entries)
    2. 2514489Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110913] (3 PDB entries)
      Uniprot Q02555 364-447 ! Uniprot Q02555 366-453 ! Uniprot Q02555 363-443
    3. 2514494Species Thermotoga maritima [TaxId:2336] [82644] (1 PDB entry)
  8. 2514497Spermatid perinuclear RNA-binding protein [143210] (1 species)
  9. 2514500staufen homolog 2 [110914] (1 species)
  10. 2514503Staufen, domain III [54772] (1 species)
  11. 2514507TAR RNA-binding protein 2 [143208] (1 species)
    duplication: contains three dsRBD
  12. 2514510tRNA-dihydrouridine synthase 2-like, Dus2l (2310016k04Rik) [117903] (1 species)
  13. 2514513automated matches [191157] (3 species)
    not a true protein
    1. 2514514Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255423] (1 PDB entry)
    2. 2514516Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [255462] (2 PDB entries)
    3. 2514519Species Human (Homo sapiens) [TaxId:9606] [189334] (1 PDB entry)

More info for Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD)

Timeline for Family d.50.1.1: Double-stranded RNA-binding domain (dsRBD):