PDB entry 2nug

View 2nug on RCSB PDB site
Description: Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 1.7-Angstrom Resolution
Class: hydrolase/RNA
Keywords: Ribonuclease III, dsRNA, RNA interference, endonucleolytic cleavage, hydrolase-RNA COMPLEX
Deposited on 2006-11-09, released 2007-11-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease III
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: rnc
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2nuga1, d2nuga2
  • Chain 'B':
    Compound: Ribonuclease III
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: rnc
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2nugb1, d2nugb2
  • Chain 'C':
    Compound: 5'-r(p*ap*ap*gp*gp*up*cp*ap*up*up*cp*g)-3'
  • Chain 'D':
    Compound: 5'-r(p*ap*ap*gp*gp*up*cp*ap*up*up*cp*g)-3'
  • Chain 'E':
    Compound: 5'-r(p*ap*gp*up*gp*gp*cp*cp*up*up*gp*c)-3'
  • Chain 'F':
    Compound: 5'-r(p*ap*gp*up*gp*gp*cp*cp*up*up*gp*c)-3'
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2nugA (A:)
    mkmleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqysp
    nkregflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyids
    grdanftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphh
    kkkfiveakikeyrtlgegkskkeaeqraaeeliklleese
    

    Sequence, based on observed residues (ATOM records): (download)
    >2nugA (A:)
    mleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqyspnk
    regflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyidsgr
    danftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphhkk
    kfiveakikeyrtlgegkskkeaeqraaeeliklle
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2nugB (B:)
    mkmleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqysp
    nkregflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyids
    grdanftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphh
    kkkfiveakikeyrtlgegkskkeaeqraaeeliklleese
    

    Sequence, based on observed residues (ATOM records): (download)
    >2nugB (B:)
    mleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqyspnk
    regflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyidsgr
    danftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphhkk
    kfiveakikeyrtlgegkskkeaeqraaeelikllees
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.