Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2955209Superfamily d.58.32: FAD-linked oxidases, C-terminal domain [55103] (7 families) (S)
    duplication: contains two subdomains of this fold
  5. 2955316Family d.58.32.0: automated matches [227166] (1 protein)
    not a true family
  6. 2955317Protein automated matches [226875] (5 species)
    not a true protein

Species:

  1. 2955318Chromobacterium sp. [TaxId:507619] [390319] (1 PDB entry)
  2. 2955320Flax (Linum usitatissimum) [TaxId:4006] [353683] (1 PDB entry)
  3. 2955323Maize (Zea mays) [TaxId:4577] [269671] (10 PDB entries)
    1. Domains for 4ml8:
      1. 2955335Domain d4ml8a2: 4ml8 A:235-516 [269680]
        Other proteins in same PDB: d4ml8a1, d4ml8b1, d4ml8c1, d4ml8d1
        automated match to d2qpma2
        complexed with fad, peg
      2. 2955336Domain d4ml8b2: 4ml8 B:235-515 [269676]
        Other proteins in same PDB: d4ml8a1, d4ml8b1, d4ml8c1, d4ml8d1
        automated match to d2qpma2
        complexed with fad, peg
      3. 2955337Domain d4ml8c2: 4ml8 C:235-516 [269678]
        Other proteins in same PDB: d4ml8a1, d4ml8b1, d4ml8c1, d4ml8d1
        automated match to d2qpma2
        complexed with fad, peg
      4. 2955338Domain d4ml8d2: 4ml8 D:235-514 [269674]
        Other proteins in same PDB: d4ml8a1, d4ml8b1, d4ml8c1, d4ml8d1
        automated match to d2qpma2
        complexed with fad, peg
    2. Domains for 4mla:
      1. 2955332Domain d4mlaa2: 4mla A:235-515 [269682]
        Other proteins in same PDB: d4mlaa1, d4mlab1
        automated match to d2qpma2
        complexed with edo, fad, gol, ipa
      2. 2955333Domain d4mlab2: 4mla B:235-515 [269673]
        Other proteins in same PDB: d4mlaa1, d4mlab1
        automated match to d2qpma2
        complexed with edo, fad, gol, ipa
    3. Domain for 4o95:
    4. Domains for 4oal:
      1. 2955328Domain d4oala2: 4oal A:247-531 [270984]
        Other proteins in same PDB: d4oala1, d4oalb1
        automated match to d1w1oa1
        complexed with 245, dms, fad
      2. 2955329Domain d4oalb2: 4oal B:247-531 [270987]
        Other proteins in same PDB: d4oala1, d4oalb1
        automated match to d1w1oa1
        complexed with 245, dms, fad
    5. Domain for 5hhz:
    6. Domain for 5hmr:
    7. Domain for 5hqx:
    8. Domain for 6yao:
    9. Domain for 6yap:
    10. Domain for 6yaq:
  4. 2955339Rhodococcus jostii [TaxId:101510] [319927] (4 PDB entries)
    1. Domains for 5fxd:
      1. 2955340Domain d5fxda2: 5fxd A:239-526 [319989]
        Other proteins in same PDB: d5fxda1, d5fxdb1
        automated match to d1e0ya1
        complexed with fad, gol, h7y
      2. 2955341Domain d5fxdb2: 5fxd B:239-526 [319979]
        Other proteins in same PDB: d5fxda1, d5fxdb1
        automated match to d1e0ya1
        complexed with fad, gol, h7y
    2. Domains for 5fxe:
      1. 2955344Domain d5fxea2: 5fxe A:239-526 [319936]
        Other proteins in same PDB: d5fxea1, d5fxeb1
        automated match to d1e0ya1
        complexed with ciy, fad, gol
      2. 2955345Domain d5fxeb2: 5fxe B:239-526 [319928]
        Other proteins in same PDB: d5fxea1, d5fxeb1
        automated match to d1e0ya1
        complexed with ciy, fad, gol
    3. Domains for 5fxf:
      1. 2955342Domain d5fxfa2: 5fxf A:239-526 [320045]
        Other proteins in same PDB: d5fxfa1, d5fxfb1
        automated match to d1e0ya1
        complexed with bez, fad, gol
      2. 2955343Domain d5fxfb2: 5fxf B:239-526 [319995]
        Other proteins in same PDB: d5fxfa1, d5fxfb1
        automated match to d1e0ya1
        complexed with bez, fad, gol
    4. Domains for 5fxp:
      1. 2955346Domain d5fxpa2: 5fxp A:239-526 [320116]
        Other proteins in same PDB: d5fxpa1, d5fxpb1
        automated match to d1e0ya1
        complexed with fad, gol, v55
      2. 2955347Domain d5fxpb2: 5fxp B:239-526 [320029]
        Other proteins in same PDB: d5fxpa1, d5fxpb1
        automated match to d1e0ya1
        complexed with fad, gol, v55
  5. 2955348Thale cress (Arabidopsis thaliana) [TaxId:3702] [225038] (2 PDB entries)
    1. Domain for 2exr:
    2. Domain for 2q4w:

More info for Protein automated matches from d.58.32.0: automated matches

Timeline for Protein automated matches from d.58.32.0: automated matches: