Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1074917Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1074918Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1077042Family a.1.1.3: Phycocyanin-like phycobilisome proteins [46532] (7 proteins)
    oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
    binds a bilin chromophore
  6. 1077200Protein automated matches [190531] (8 species)
    not a true protein

Species:

  1. 1077201Gloeobacter violaceus [TaxId:33072] [188397] (4 PDB entries)
    1. Domains for 2vjh:
      1. 1077202Domain d2vjha_: 2vjh A: [168645]
        automated match to d1b8da_
        complexed with peb, pub
      2. 1077203Domain d2vjhb_: 2vjh B: [168646]
        automated match to d1qgwd_
        complexed with peb, pub
      3. 1077204Domain d2vjhc_: 2vjh C: [168647]
        automated match to d1b8da_
        complexed with peb, pub
      4. 1077205Domain d2vjhd_: 2vjh D: [168648]
        automated match to d1qgwd_
        complexed with peb, pub
    2. Domains for 2vjr:
      1. 1077220Domain d2vjra_: 2vjr A: [168659]
        automated match to d1i7ya_
        complexed with cyc
      2. 1077221Domain d2vjrb_: 2vjr B: [168660]
        automated match to d1i7yb_
        complexed with cyc
    3. Domains for 2vjt:
      1. 1077218Domain d2vjta_: 2vjt A: [168661]
        automated match to d1kn1a_
        complexed with cyc
      2. 1077219Domain d2vjtb_: 2vjt B: [168662]
        automated match to d1allb_
        complexed with cyc
    4. Domains for 2vml:
      1. 1077206Domain d2vmla_: 2vml A: [168702]
        automated match to d1i7ya_
        complexed with cyc
      2. 1077207Domain d2vmlb_: 2vml B: [168703]
        automated match to d1i7yb_
        complexed with cyc
      3. 1077208Domain d2vmlc_: 2vml C: [168704]
        automated match to d1i7ya_
        complexed with cyc
      4. 1077209Domain d2vmld_: 2vml D: [168705]
        automated match to d1i7yb_
        complexed with cyc
      5. 1077210Domain d2vmle_: 2vml E: [168706]
        automated match to d1i7ya_
        complexed with cyc
      6. 1077211Domain d2vmlf_: 2vml F: [168707]
        automated match to d1i7yb_
        complexed with cyc
      7. 1077212Domain d2vmlg_: 2vml G: [168708]
        automated match to d1i7ya_
        complexed with cyc
      8. 1077213Domain d2vmlh_: 2vml H: [168709]
        automated match to d1i7yb_
        complexed with cyc
      9. 1077214Domain d2vmli_: 2vml I: [168710]
        automated match to d1i7ya_
        complexed with cyc
      10. 1077215Domain d2vmlj_: 2vml J: [168711]
        automated match to d1i7yb_
        complexed with cyc
      11. 1077216Domain d2vmlk_: 2vml K: [168712]
        automated match to d1i7ya_
        complexed with cyc
      12. 1077217Domain d2vmll_: 2vml L: [168713]
        automated match to d1i7yb_
        complexed with cyc
  2. 1077222Mastigocladus laminosus [TaxId:83541] [187515] (2 PDB entries)
    1. Domains for 2c7l:
      1. 1077225Domain d2c7la_: 2c7l A: [163287]
        automated match to d1i7ya_
        complexed with bla, cyc
      2. 1077226Domain d2c7lb_: 2c7l B: [163288]
        automated match to d1i7yb_
        complexed with bla, cyc
    2. Domains for 2j96:
      1. 1077223Domain d2j96a_: 2j96 A: [165947]
        automated match to d1i7ya_
        complexed with pvn
      2. 1077224Domain d2j96b_: 2j96 B: [165948]
        automated match to d1i7ya_
        complexed with pvn
  3. 1077227Porphyridium purpureum [TaxId:35688] [194584] (1 PDB entry)
  4. 1077230Red algae (Galdieria sulphuraria) [TaxId:130081] [188789] (2 PDB entries)
    1. Domains for 3brp:
      1. 1077233Domain d3brpa_: 3brp A: [172801]
        automated match to d1phna_
        complexed with bla
      2. 1077234Domain d3brpb_: 3brp B: [172802]
        automated match to d1phnb_
        complexed with bla
    2. Domains for 3kvs:
      1. 1077231Domain d3kvsa_: 3kvs A: [179738]
        automated match to d1phna_
        complexed with bla
      2. 1077232Domain d3kvsb_: 3kvs B: [179739]
        automated match to d1phnb_
        complexed with bla
  5. 1077235Red algae (Gracilaria chilensis) [TaxId:2775] [187492] (1 PDB entry)
  6. 1077248Synechococcus elongatus [TaxId:1140] [193231] (2 PDB entries)
    1. Domains for 4f0u:
      1. 1077252Domain d4f0ub_: 4f0u B: [193925]
        automated match to d3dbjb_
        complexed with cyc
      2. 1077253Domain d4f0uc_: 4f0u C: [193920]
        automated match to d1kn1a_
        complexed with cyc
      3. 1077254Domain d4f0uf_: 4f0u F: [193922]
        automated match to d3dbjb_
        complexed with cyc
    2. Domains for 4h0m:
      1. 1077249Domain d4h0me_: 4h0m E: [193232]
        automated match to d1ha7a_
        complexed with cyc
      2. 1077250Domain d4h0mp_: 4h0m P: [193915]
        automated match to d1cpcb_
        complexed with cyc
      3. 1077251Domain d4h0mr_: 4h0m R: [193916]
        automated match to d1cpcb_
        complexed with cyc
  7. 1077255Synechocystis sp. [TaxId:1111708] [193921] (1 PDB entry)
  8. 1077258Thermosynechococcus vulcanus [TaxId:32053] [188656] (1 PDB entry)

More info for Protein automated matches from a.1.1.3: Phycocyanin-like phycobilisome proteins

Timeline for Protein automated matches from a.1.1.3: Phycocyanin-like phycobilisome proteins: