Lineage for Protein: N-acylamino acid racemase

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.54: Enolase N-terminal domain-like [54825] (1 superfamily)
    beta(3)-alpha(3); meander and up-and-down bundle
  4. Superfamily d.54.1: Enolase N-terminal domain-like [54826] (2 families) (S)
  5. Family d.54.1.1: Enolase N-terminal domain-like [54827] (15 proteins)
    C-terminal domain is beta/alpha-barrel
  6. Protein N-acylamino acid racemase [110937] (4 species)

Species:

  1. Amycolatopsis sp. [TaxId:37632] [110938] (4 PDB entries)
    Uniprot Q44244; similar activity to a remotely related O-succinylbenzoate synthase from E. coli
    1. Domains for 1sja:
      1. Domain d1sjaa2: 1sja A:1-125 [105609]
        Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
        complexed with ame, mg
      2. Domain d1sjab2: 1sja B:1-125 [105611]
        Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
        complexed with ame, mg
      3. Domain d1sjac2: 1sja C:1-125 [105613]
        Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
        complexed with ame, mg
      4. Domain d1sjad2: 1sja D:1-125 [105615]
        Other proteins in same PDB: d1sjaa1, d1sjab1, d1sjac1, d1sjad1
        complexed with ame, mg
    2. Domains for 1sjb:
      1. Domain d1sjba2: 1sjb A:1-125 [105617]
        Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
        complexed with mg, osb
      2. Domain d1sjbb2: 1sjb B:1-125 [105619]
        Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
        complexed with mg, osb
      3. Domain d1sjbc2: 1sjb C:1-125 [105621]
        Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
        complexed with mg, osb
      4. Domain d1sjbd2: 1sjb D:1-125 [105623]
        Other proteins in same PDB: d1sjba1, d1sjbb1, d1sjbc1, d1sjbd1
        complexed with mg, osb
    3. Domains for 1sjc:
      1. Domain d1sjca2: 1sjc A:1-125 [105625]
        Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
        complexed with mg, smg
      2. Domain d1sjcb2: 1sjc B:1-125 [105627]
        Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
        complexed with mg, smg
      3. Domain d1sjcc2: 1sjc C:1-125 [105629]
        Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
        complexed with mg, smg
      4. Domain d1sjcd2: 1sjc D:1-125 [105631]
        Other proteins in same PDB: d1sjca1, d1sjcb1, d1sjcc1, d1sjcd1
        complexed with mg, smg
    4. Domains for 1sjd:
      1. Domain d1sjda2: 1sjd A:1-125 [105633]
        Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
        complexed with npg
      2. Domain d1sjdb2: 1sjd B:1-125 [105635]
        Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
        complexed with npg
      3. Domain d1sjdc2: 1sjd C:1-125 [105637]
        Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
        complexed with npg
      4. Domain d1sjdd2: 1sjd D:1-125 [105639]
        Other proteins in same PDB: d1sjda1, d1sjdb1, d1sjdc1, d1sjdd1
        complexed with npg
  2. Deinococcus radiodurans [TaxId:1299] [110939] (5 PDB entries)
    Uniprot Q9RYA6
    1. Domains for 1r0m:
      1. Domain d1r0ma2: 1r0m A:6-132 [104748]
        Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
      2. Domain d1r0mb2: 1r0m B:6-132 [104750]
        Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
      3. Domain d1r0mc2: 1r0m C:6-132 [104752]
        Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
      4. Domain d1r0md2: 1r0m D:6-132 [104754]
        Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1
    2. Domains for 1xpy:
      1. Domain d1xpya2: 1xpy A:6-132 [115811]
        Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
        complexed with mg, nlq
      2. Domain d1xpyb2: 1xpy B:6-132 [115813]
        Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
        complexed with mg, nlq
      3. Domain d1xpyc2: 1xpy C:6-132 [115815]
        Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
        complexed with mg, nlq
      4. Domain d1xpyd2: 1xpy D:6-132 [115817]
        Other proteins in same PDB: d1xpya1, d1xpyb1, d1xpyc1, d1xpyd1
        complexed with mg, nlq
    3. Domains for 1xs2:
      1. Domain d1xs2a2: 1xs2 A:6-132 [115899]
        Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
        complexed with mg
      2. Domain d1xs2b2: 1xs2 B:6-132 [115901]
        Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
        complexed with mg
      3. Domain d1xs2c2: 1xs2 C:6-132 [115903]
        Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
        complexed with mg
      4. Domain d1xs2d2: 1xs2 D:6-132 [115905]
        Other proteins in same PDB: d1xs2a1, d1xs2b1, d1xs2c1, d1xs2d1
        complexed with mg
    4. Domains for 2bah:
      1. Domain d2baha1: 2bah A:6-132 [303566]
        Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
        automated match to d2fkpa2
        mutant
      2. Domain d2bahb1: 2bah B:6-132 [303568]
        Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
        automated match to d2fkpa2
        mutant
      3. Domain d2bahc1: 2bah C:6-132 [303570]
        Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
        automated match to d2fkpa2
        mutant
      4. Domain d2bahd1: 2bah D:6-132 [303572]
        Other proteins in same PDB: d2baha2, d2bahb2, d2bahc2, d2bahd2
        automated match to d2fkpa2
        mutant
    5. Domains for 2fkp:
      1. Domain d2fkpa2: 2fkp A:6-132 [133666]
        Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
        mutant
      2. Domain d2fkpb1: 2fkp B:6-132 [197919]
        Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
        automated match to d2fkpa2
        mutant
      3. Domain d2fkpc1: 2fkp C:6-132 [197921]
        Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
        automated match to d2fkpa2
        mutant
      4. Domain d2fkpd1: 2fkp D:6-132 [197923]
        Other proteins in same PDB: d2fkpa1, d2fkpb2, d2fkpc2, d2fkpd2
        automated match to d2fkpa2
        mutant
  3. Enterococcus faecalis [TaxId:1351] [117925] (1 PDB entry)
    Uniprot Q838J7; EF0450; protein assignment by sequence similarity
  4. Listeria innocua [TaxId:1642] [117926] (1 PDB entry)
    Uniprot Q927X3; Lin2664; protein assignment by sequence similarity

More info for Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like

Timeline for Protein N-acylamino acid racemase from d.54.1.1: Enolase N-terminal domain-like: