SCOPe 2.08: Domain d1r0md2: 1r0m D:6-132

Lineage for d1r0md2 (1r0m D:6-132)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.54: Enolase N-terminal domain-like [54825] (1 superfamily)
   beta(3)-alpha(3); meander and up-and-down bundle

4. Superfamily d.54.1: Enolase N-terminal domain-like [54826] (2 families)

5. Family d.54.1.1: Enolase N-terminal domain-like [54827] (15 proteins)
   C-terminal domain is beta/alpha-barrel

6. Protein N-acylamino acid racemase [110937] (4 species)

7. Species Deinococcus radiodurans [TaxId:1299] [110939] (5 PDB entries)
   Uniprot Q9RYA6

8. Domain d1r0md2: 1r0m D:6-132 [104754]
   Other proteins in same PDB: d1r0ma1, d1r0mb1, d1r0mc1, d1r0md1

Details for d1r0md2

PDB Entry: 1r0m, 1.3 Å

PDB Description: Structure of Deinococcus radiodurans N-acylamino acid racemase at 1.3 : insights into a flexible binding pocket and evolution of enzymatic activity

PDB Compounds: (D:) N-acylamino acid racemase

SCOPe Domain Sequences for d1r0md2:

Sequence, based on SEQRES records:

>d1r0md2 d.54.1.1 (D:6-132) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]}
rmfkieaaeivvarlplkfrfetsfgvqthkvvpllilhgegvqgvaegtmearpmyree
tiagaldllrgtflpailgqtfanpeavsdalgsyrgnrmaramvemaawdlwartlgvp
lgtllgg

Sequence, based on observed residues (ATOM records):

>d1r0md2 d.54.1.1 (D:6-132) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]}
rmfkieaaeivvarlplkthkvvpllilhgegvqgvaegtmearpmyreetiagaldllr
gtflpailgqtfanpeavsdalgsyrgnrmaramvemaawdlwartlgvplgtllgg

Timeline for d1r0md2:

• d1r0md2 first appeared in SCOP 1.69
  
• d1r0md2 appears in SCOPe 2.07