Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2947226Fold d.52: Alpha-lytic protease prodomain-like [54805] (10 superfamilies)
    core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta
  4. 2947245Superfamily d.52.2: GMP synthetase C-terminal dimerisation domain [54810] (2 families) (S)
    automatically mapped to Pfam PF00958
  5. 2947262Family d.52.2.0: automated matches [227193] (1 protein)
    not a true family
  6. 2947263Protein automated matches [226919] (5 species)
    not a true protein

Species:

  1. 2947264Coxiella burnetii [TaxId:777] [256104] (1 PDB entry)
  2. 2947269Methanocaldococcus jannaschii [TaxId:243232] [383992] (1 PDB entry)
  3. 2947274Neisseria gonorrhoeae [TaxId:485] [326535] (1 PDB entry)
  4. 2947281Pyrococcus horikoshii OT3 [TaxId:70601] [311264] (2 PDB entries)
    1. Domains for 2dpl:
      1. 2947282Domain d2dpla2: 2dpl A:190-308 [204020]
        Other proteins in same PDB: d2dpla1, d2dplb1
        automated match to d1gpma3
      2. 2947283Domain d2dplb2: 2dpl B:190-308 [204022]
        Other proteins in same PDB: d2dpla1, d2dplb1
        automated match to d1gpma3
    2. Domain for 2z0c:
  5. 2947285Pyrococcus horikoshii [TaxId:53953] [225701] (2 PDB entries)
    1. Domain for 2z0c:
    2. Domains for 3a4i:
      1. 2947287Domain d3a4ia2: 3a4i A:190-308 [208102]
        Other proteins in same PDB: d3a4ia1, d3a4ib1
        automated match to d1gpma3
      2. 2947288Domain d3a4ib2: 3a4i B:190-308 [208104]
        Other proteins in same PDB: d3a4ia1, d3a4ib1
        automated match to d1gpma3

More info for Protein automated matches from d.52.2.0: automated matches

Timeline for Protein automated matches from d.52.2.0: automated matches: