Lineage for d2dplb1 (2dpl B:6-189)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2106293Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families) (S)
    share similar mode of ligand (Adenosine group) binding
    can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group
  5. 2106562Family c.26.2.0: automated matches [191320] (1 protein)
    not a true family
  6. 2106563Protein automated matches [190116] (24 species)
    not a true protein
  7. 2106632Species Pyrococcus horikoshii OT3 [TaxId:70601] [311263] (4 PDB entries)
  8. 2106634Domain d2dplb1: 2dpl B:6-189 [204021]
    Other proteins in same PDB: d2dpla2, d2dplb2
    automated match to d1gpma1

Details for d2dplb1

PDB Entry: 2dpl (more details), 1.43 Å

PDB Description: Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3
PDB Compounds: (B:) GMP synthase [glutamine-hydrolyzing] subunit B

SCOPe Domain Sequences for d2dplb1:

Sequence, based on SEQRES records: (download)

>d2dplb1 c.26.2.0 (B:6-189) automated matches {Pyrococcus horikoshii OT3 [TaxId: 70601]}
fveekvreiretvgdskaiialsggvdsstaavlahkaigdrlhavfvntgflrkgepef
vvktfrdefgmnlhyvdaqdrffsalkgvtdpeekrkiigrvfievfeevakkigaeyli
qgtiapdwiesqgkikshhnvgglpeklnlklieplrdlykdevrelakflglpekiynr
mpfp

Sequence, based on observed residues (ATOM records): (download)

>d2dplb1 c.26.2.0 (B:6-189) automated matches {Pyrococcus horikoshii OT3 [TaxId: 70601]}
fveekvreiretvgdskaiialsggvdsstaavlahkaigdrlhavfvntgflrkgepef
vvktfrdefgmnlhyvdaqdrffsalkgvtdpeekrkiigrvfievfeevakkigaeyli
qgtilklieplrdlykdevrelakflglpekiynrmpfp

SCOPe Domain Coordinates for d2dplb1:

Click to download the PDB-style file with coordinates for d2dplb1.
(The format of our PDB-style files is described here.)

Timeline for d2dplb1:

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Domains from same chain:
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d2dplb2