SCOPe 2.06: Species: Human (Homo sapiens) [TaxId: 9606]

Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.13: Chromo domain-like [54160] (4 families)
SH3-like barrel is capped by a C-terminal helix

Family b.34.13.2: Chromo domain [54165] (8 proteins)
lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold

Protein automated matches [191035] (3 species)
not a true protein
Species Human (Homo sapiens) [TaxId:9606] [188859] (13 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

Domain(s) for 2d9u:
- Domain d2d9ua1: 2d9u A:8-68 [241527]
  Other proteins in same PDB: d2d9ua2, d2d9ua3
  automated match to d2dnta1
Domain(s) for 2k28:
- Domain d2k28a1: 2k28 A:3-60 [242355]
  Other proteins in same PDB: d2k28a2
  automated match to d2dnta1
Domain(s) for 2mj8:
- Domain d2mj8a1: 2mj8 A:2-64 [256432]
  Other proteins in same PDB: d2mj8a2
  automated match to d2dnta1
Domain(s) for 3gv6:
- Domain d3gv6a_: 3gv6 A: [177024]
  automated match to d2dnva1
  protein/DNA complex
Domain(s) for 3h91:
1. Domain d3h91a_: 3h91 A: [177326]
  automated match to d2dnva1
  protein/DNA complex
2. Domain d3h91b_: 3h91 B: [177327]
  automated match to d2dnva1
  protein/DNA complex
Domain(s) for 3i3c:
1. Domain d3i3ca_: 3i3c A: [178043]
  automated match to d1s4za_
  complexed with na
2. Domain d3i3cb_: 3i3c B: [178044]
  automated match to d1s4za_
  complexed with na
3. Domain d3i3cc_: 3i3c C: [178045]
  automated match to d1s4za_
  complexed with na
4. Domain d3i3cd_: 3i3c D: [178046]
  automated match to d1s4za_
  complexed with na
Domain(s) for 3i8z:
- Domain d3i8za_: 3i8z A: [178150]
  automated match to d2dnva1
Domain(s) for 3i90:
1. Domain d3i90a_: 3i90 A: [178151]
  automated match to d2dnva1
2. Domain d3i90b_: 3i90 B: [178152]
  automated match to d2dnva1
Domain(s) for 3i91:
1. Domain d3i91a_: 3i91 A: [178153]
  automated match to d2dnva1
2. Domain d3i91b_: 3i91 B: [178154]
  automated match to d2dnva1
Domain(s) for 3kup:
1. Domain d3kupa_: 3kup A: [179720]
  automated match to d1dz1a_
  complexed with unx
2. Domain d3kupb_: 3kup B: [179721]
  automated match to d1dz1a_
  complexed with unx
3. Domain d3kupc_: 3kup C: [179722]
  automated match to d1dz1a_
  complexed with unx
4. Domain d3kupd_: 3kup D: [179723]
  automated match to d1dz1a_
  complexed with unx
Domain(s) for 3tzd:
- Domain d3tzda1: 3tzd A:29-81 [217114]
  Other proteins in same PDB: d3tzda2
  automated match to d4haea_
  protein/DNA complex
Domain(s) for 4hae:
- Domain d4haea1: 4hae A:2-60 [194545]
  Other proteins in same PDB: d4haea2
  automated match to d2dnta1
  complexed with so4, unx
Domain(s) for 5afw:
1. Domain d5afwa1: 5afw A:270-362 [280235]
  automated match to d2b2yb2
  complexed with cl, edo
2. Domain d5afwa2: 5afw A:374-443 [280238]
  automated match to d2b2ta2
  complexed with cl, edo

More info for Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches:

Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches first appeared in SCOPe 2.01
Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches appears in SCOPe 2.05
Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches appears in SCOPe 2.07
Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches appears in the current release, SCOPe 2.08