Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2376890Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2378848Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 2378892Family b.34.13.2: Chromo domain [54165] (8 protein domains)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 2378969Protein automated matches [191035] (3 species)
    not a true protein
  7. 2378970Species Human (Homo sapiens) [TaxId:9606] [188859] (13 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2d9u:
  2. Domain(s) for 2k28:
  3. Domain(s) for 2mj8:
  4. Domain(s) for 3gv6:
  5. Domain(s) for 3h91:
    1. 2378973Domain d3h91a_: 3h91 A: [177326]
      automated match to d2dnva1
      protein/DNA complex
    2. 2378974Domain d3h91b_: 3h91 B: [177327]
      automated match to d2dnva1
      protein/DNA complex
  6. Domain(s) for 3i3c:
    1. 2378987Domain d3i3ca_: 3i3c A: [178043]
      automated match to d1s4za_
      complexed with na
    2. 2378988Domain d3i3cb_: 3i3c B: [178044]
      automated match to d1s4za_
      complexed with na
    3. 2378989Domain d3i3cc_: 3i3c C: [178045]
      automated match to d1s4za_
      complexed with na
    4. 2378990Domain d3i3cd_: 3i3c D: [178046]
      automated match to d1s4za_
      complexed with na
  7. Domain(s) for 3i8z:
  8. Domain(s) for 3i90:
    1. 2378985Domain d3i90a_: 3i90 A: [178151]
      automated match to d2dnva1
    2. 2378986Domain d3i90b_: 3i90 B: [178152]
      automated match to d2dnva1
  9. Domain(s) for 3i91:
    1. 2378976Domain d3i91a_: 3i91 A: [178153]
      automated match to d2dnva1
    2. 2378977Domain d3i91b_: 3i91 B: [178154]
      automated match to d2dnva1
  10. Domain(s) for 3kup:
    1. 2378980Domain d3kupa_: 3kup A: [179720]
      automated match to d1dz1a_
      complexed with unx
    2. 2378981Domain d3kupb_: 3kup B: [179721]
      automated match to d1dz1a_
      complexed with unx
    3. 2378982Domain d3kupc_: 3kup C: [179722]
      automated match to d1dz1a_
      complexed with unx
    4. 2378983Domain d3kupd_: 3kup D: [179723]
      automated match to d1dz1a_
      complexed with unx
  11. Domain(s) for 3tzd:
  12. Domain(s) for 4hae:
  13. Domain(s) for 5afw:
    1. 2378978Domain d5afwa1: 5afw A:270-362 [280235]
      automated match to d2b2yb2
      complexed with cl, edo
    2. 2378979Domain d5afwa2: 5afw A:374-443 [280238]
      automated match to d2b2ta2
      complexed with cl, edo

More info for Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 automated matches: