Lineage for d2k28a1 (2k28 A:3-60)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2053585Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2055542Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 2055586Family b.34.13.2: Chromo domain [54165] (8 proteins)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 2055663Protein automated matches [191035] (3 species)
    not a true protein
  7. 2055664Species Human (Homo sapiens) [TaxId:9606] [188859] (13 PDB entries)
  8. 2055685Domain d2k28a1: 2k28 A:3-60 [242355]
    Other proteins in same PDB: d2k28a2
    automated match to d2dnta1

Details for d2k28a1

PDB Entry: 2k28 (more details)

PDB Description: solution nmr structure of the chromo domain of the chromobox protein homolog 4
PDB Compounds: (A:) E3 SUMO-protein ligase CBX4

SCOPe Domain Sequences for d2k28a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2k28a1 b.34.13.2 (A:3-60) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d2k28a1:

Click to download the PDB-style file with coordinates for d2k28a1.
(The format of our PDB-style files is described here.)

Timeline for d2k28a1:

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