Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.58: Ferredoxin-like [54861] (59 superfamilies) alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 |
Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families) |
Family d.58.6.1: Nucleoside diphosphate kinase, NDK [54920] (2 proteins) |
Protein automated matches [190032] (11 species) not a true protein |
Acanthamoeba polyphaga mimivirus [TaxId:212035] [188891] (23 PDB entries) |
Domain d3ddia_: 3ddi A: [173834] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3ddib_: 3ddi B: [173835] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3dkda_: 3dkd A: [174030] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3dkdb_: 3dkd B: [174031] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3ee3a_: 3ee3 A: [174870] automated match to d2b8pa1 complexed with cdp, mg |
Domain d3ee3b_: 3ee3 B: [174871] automated match to d2b8pa1 complexed with cdp, mg |
Domain d3ee3c_: 3ee3 C: [174872] automated match to d2b8pa1 complexed with cdp, mg |
Domain d3ee3d_: 3ee3 D: [174873] automated match to d2b8pa1 complexed with cdp, mg |
Domain d3ee3e_: 3ee3 E: [174874] automated match to d2b8pa1 complexed with cdp, mg |
Domain d3ee3f_: 3ee3 F: [174875] automated match to d2b8pa1 complexed with cdp, mg |
Domain d3eica_: 3eic A: [174944] automated match to d2b8pa1 complexed with mg, udp |
Domain d3eicb_: 3eic B: [174945] automated match to d2b8pa1 complexed with mg, udp |
Domain d3eicc_: 3eic C: [174946] automated match to d2b8pa1 complexed with mg, udp |
Domain d3eicd_: 3eic D: [174947] automated match to d2b8pa1 complexed with mg, udp |
Domain d3eice_: 3eic E: [174948] automated match to d2b8pa1 complexed with mg, udp |
Domain d3eicf_: 3eic F: [174949] automated match to d2b8pa1 complexed with mg, udp |
Domain d3ejma_: 3ejm A: [174986] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3ejmb_: 3ejm B: [174987] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3elha_: 3elh A: [175055] automated match to d2b8pa1 complexed with dud, mg |
Domain d3elhb_: 3elh B: [175056] automated match to d2b8pa1 complexed with dud, mg |
Domain d3elhc_: 3elh C: [175057] automated match to d2b8pa1 complexed with dud, mg |
Domain d3elhd_: 3elh D: [175058] automated match to d2b8pa1 complexed with dud, mg |
Domain d3elhe_: 3elh E: [175059] automated match to d2b8pa1 complexed with dud, mg |
Domain d3elhf_: 3elh F: [175060] automated match to d2b8pa1 complexed with dud, mg |
Domain d3em1a_: 3em1 A: [175071] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3em1b_: 3em1 B: [175072] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3emta_: 3emt A: [175090] automated match to d2b8pa1 complexed with dgi, mg; mutant |
Domain d3emtb_: 3emt B: [175091] automated match to d2b8pa1 complexed with dgi, mg; mutant |
Domain d3enaa_: 3ena A: [175096] automated match to d2b8pa1 complexed with dgi, mg; mutant |
Domain d3enab_: 3ena B: [175097] automated match to d2b8pa1 complexed with dgi, mg; mutant |
Domain d3etma_: 3etm A: [175214] automated match to d2b8pa1 complexed with cdp, mg; mutant |
Domain d3etmb_: 3etm B: [175215] automated match to d2b8pa1 complexed with cdp, mg; mutant |
Domain d3evma_: 3evm A: [175255] automated match to d2b8pa1 complexed with mg, yyy; mutant |
Domain d3evmb_: 3evm B: [175256] automated match to d2b8pa1 complexed with mg, yyy; mutant |
Domain d3evoa_: 3evo A: [175257] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evob_: 3evo B: [175258] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evwa_: 3evw A: [175261] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evwb_: 3evw B: [175262] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evwc_: 3evw C: [175263] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evwd_: 3evw D: [175264] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evwe_: 3evw E: [175265] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3evwf_: 3evw F: [175266] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fbba_: 3fbb A: [175637] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fbbb_: 3fbb B: [175638] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fbbc_: 3fbb C: [175639] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fbbd_: 3fbb D: [175640] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fbbe_: 3fbb E: [175641] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fbbf_: 3fbb F: [175642] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fbca_: 3fbc A: [175643] automated match to d2b8pa1 complexed with mg, po4, tyd; mutant |
Domain d3fbcb_: 3fbc B: [175644] automated match to d2b8pa1 complexed with mg, po4, tyd; mutant |
Domain d3fbcc_: 3fbc C: [175645] automated match to d2b8pa1 complexed with mg, po4, tyd; mutant |
Domain d3fbcd_: 3fbc D: [175646] automated match to d2b8pa1 complexed with mg, po4, tyd; mutant |
Domain d3fbce_: 3fbc E: [175647] automated match to d2b8pa1 complexed with mg, po4, tyd; mutant |
Domain d3fbcf_: 3fbc F: [175648] automated match to d2b8pa1 complexed with mg, po4, tyd; mutant |
Domain d3fbea_: 3fbe A: [175651] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3fbeb_: 3fbe B: [175652] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3fbec_: 3fbe C: [175653] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3fbed_: 3fbe D: [175654] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3fbee_: 3fbe E: [175655] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3fbef_: 3fbe F: [175656] automated match to d2b8pa1 complexed with gdp, mg; mutant |
Domain d3fbfa_: 3fbf A: [175657] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fbfb_: 3fbf B: [175658] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fbfc_: 3fbf C: [175659] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fbfd_: 3fbf D: [175660] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fbfe_: 3fbf E: [175661] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fbff_: 3fbf F: [175662] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3fc9a_: 3fc9 A: [175675] automated match to d2b8pa1 complexed with cdp, ctp, mg; mutant |
Domain d3fc9b_: 3fc9 B: [175676] automated match to d2b8pa1 complexed with cdp, ctp, mg; mutant |
Domain d3fc9c_: 3fc9 C: [175677] automated match to d2b8pa1 complexed with cdp, ctp, mg; mutant |
Domain d3fc9d_: 3fc9 D: [175678] automated match to d2b8pa1 complexed with cdp, ctp, mg; mutant |
Domain d3fc9e_: 3fc9 E: [175679] automated match to d2b8pa1 complexed with cdp, ctp, mg; mutant |
Domain d3fc9f_: 3fc9 F: [175680] automated match to d2b8pa1 complexed with cdp, ctp, mg; mutant |
Domain d3fcva_: 3fcv A: [175693] automated match to d2b8pa1 complexed with dud, mg; mutant |
Domain d3fcvb_: 3fcv B: [175694] automated match to d2b8pa1 complexed with dud, mg; mutant |
Domain d3fcwa_: 3fcw A: [175695] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fcwb_: 3fcw B: [175696] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fcwc_: 3fcw C: [175697] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fcwd_: 3fcw D: [175698] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fcwe_: 3fcw E: [175699] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3fcwf_: 3fcw F: [175700] automated match to d2b8pa1 complexed with mg, udp; mutant |
Domain d3g2xa_: 3g2x A: [176308] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3g2xb_: 3g2x B: [176309] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3g2xc_: 3g2x C: [176310] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3g2xd_: 3g2x D: [176311] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3g2xe_: 3g2x E: [176312] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3g2xf_: 3g2x F: [176313] automated match to d2b8pa1 complexed with mg, tyd; mutant |
Domain d3gp9a_: 3gp9 A: [176804] automated match to d2b8pa1 complexed with gdp, mg, po4 |
Domain d3gp9b_: 3gp9 B: [176805] automated match to d2b8pa1 complexed with gdp, mg, po4 |
Domain d3gp9c_: 3gp9 C: [176806] automated match to d2b8pa1 complexed with gdp, mg, po4 |
Domain d3gp9d_: 3gp9 D: [176807] automated match to d2b8pa1 complexed with gdp, mg, po4 |
Domain d3gp9e_: 3gp9 E: [176808] automated match to d2b8pa1 complexed with gdp, mg, po4 |
Domain d3gp9f_: 3gp9 F: [176809] automated match to d2b8pa1 complexed with gdp, mg, po4 |
Domain d3gpaa_: 3gpa A: [176810] automated match to d2b8pa1 complexed with cdp, mg, po4; mutant |
Domain d3gpab_: 3gpa B: [176811] automated match to d2b8pa1 complexed with cdp, mg, po4; mutant |
Domain d3gpac_: 3gpa C: [176812] automated match to d2b8pa1 complexed with cdp, mg, po4; mutant |
Domain d3gpad_: 3gpa D: [176813] automated match to d2b8pa1 complexed with cdp, mg, po4; mutant |
Domain d3gpae_: 3gpa E: [176814] automated match to d2b8pa1 complexed with cdp, mg, po4; mutant |
Domain d3gpaf_: 3gpa F: [176815] automated match to d2b8pa1 complexed with cdp, mg, po4; mutant |
Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [188810] (1 PDB entry) |
Domain d2vu5a_: 2vu5 A: [168827] automated match to d1jxva_ |
Burkholderia thailandensis [TaxId:271848] [193397] (3 PDB entries) |
Domain d4duta_: 4dut A: [220043] automated match to d4hr2b_ complexed with cl, so4 |
Domain d4dutb_: 4dut B: [220044] automated match to d4hr2b_ complexed with cl, so4 |
Domain d4ek2a_: 4ek2 A: [220588] automated match to d4hr2b_ complexed with cl, da, dms, edo |
Domain d4ek2b_: 4ek2 B: [220589] automated match to d4hr2b_ complexed with cl, da, dms, edo |
Domain d4hr2a_: 4hr2 A: [202456] automated match to d4hr2b_ complexed with adp |
Domain d4hr2b_: 4hr2 B: [193398] automated match to d3pj9d_ complexed with adp |
Campylobacter jejuni [TaxId:192222] [189538] (1 PDB entry) |
Domain d3pj9a_: 3pj9 A: [183792] automated match to d1nhkr_ complexed with so4 |
Domain d3pj9b_: 3pj9 B: [183793] automated match to d1nhkr_ complexed with so4 |
Domain d3pj9c_: 3pj9 C: [183794] automated match to d1nhkr_ complexed with so4 |
Domain d3pj9d_: 3pj9 D: [183795] automated match to d1nhkr_ complexed with so4 |
Giardia lamblia [TaxId:184922] [189932] (1 PDB entry) |
Domain d3r9la_: 3r9l A: [184859] automated match to d1be4a_ complexed with cl |
Leishmania major [TaxId:5664] [189935] (4 PDB entries) |
Domain d3ngra_: 3ngr A: [182264] automated match to d1nuea_ complexed with po4 |
Domain d3ngsa_: 3ngs A: [182265] automated match to d1nuea_ complexed with dtt, po4 |
Domain d3ngsb_: 3ngs B: [182266] automated match to d1nuea_ complexed with dtt, po4 |
Domain d3ngsc_: 3ngs C: [182267] automated match to d1nuea_ complexed with dtt, po4 |
Domain d3ngta_: 3ngt A: [182268] automated match to d1nuea_ complexed with amp |
Domain d3ngtb_: 3ngt B: [182269] automated match to d1nuea_ complexed with amp |
Domain d3ngtc_: 3ngt C: [182270] automated match to d1nuea_ complexed with amp |
Domain d3ngtd_: 3ngt D: [182271] automated match to d1nuea_ complexed with amp |
Domain d3ngte_: 3ngt E: [182272] automated match to d1nuea_ complexed with amp |
Domain d3ngtf_: 3ngt F: [182273] automated match to d1nuea_ complexed with amp |
Domain d3ngtg_: 3ngt G: [182274] automated match to d1nuea_ complexed with amp |
Domain d3ngth_: 3ngt H: [182275] automated match to d1nuea_ complexed with amp |
Domain d3ngti_: 3ngt I: [182276] automated match to d1nuea_ complexed with amp |
Domain d3ngtj_: 3ngt J: [182277] automated match to d1nuea_ complexed with amp |
Domain d3ngtk_: 3ngt K: [182278] automated match to d1nuea_ complexed with amp |
Domain d3ngtl_: 3ngt L: [182279] automated match to d1nuea_ complexed with amp |
Domain d3ngtm_: 3ngt M: [182280] automated match to d1nuea_ complexed with amp |
Domain d3ngtn_: 3ngt N: [182281] automated match to d1nuea_ complexed with amp |
Domain d3ngua_: 3ngu A: [182282] automated match to d1nuea_ complexed with adp |
Domain d3ngub_: 3ngu B: [182283] automated match to d1nuea_ complexed with adp |
Pyrococcus horikoshii [TaxId:70601] [187576] (1 PDB entry) |
Domain d2cwkb_: 2cwk B: [130926] Other proteins in same PDB: d2cwka1 automated match to d2cwka1 |
Rice (Oryza sativa) [TaxId:4530] [186751] (1 PDB entry) |
Domain d1pkub_: 1pku B: [118719] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkuc_: 1pku C: [118720] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkud_: 1pku D: [118721] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkue_: 1pku E: [118722] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkuf_: 1pku F: [118723] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkug_: 1pku G: [118724] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkuh_: 1pku H: [118725] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkui_: 1pku I: [118726] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkuj_: 1pku J: [118727] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkuk_: 1pku K: [118728] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Domain d1pkul_: 1pku L: [118729] Other proteins in same PDB: d1pkua1 automated match to d1u8wa_ |
Slime mold (Dictyostelium discoideum) [TaxId:44689] [186756] (3 PDB entries) |
Domain d1s5za_: 1s5z A: [118868] automated match to d1f6tb_ complexed with po4, son |
Domain d1s5zb_: 1s5z B: [118869] automated match to d1f6tb_ complexed with po4, son |
Domain d1s5zc_: 1s5z C: [118870] automated match to d1f6tb_ complexed with po4, son |
Domain d1s5zd_: 1s5z D: [118871] automated match to d1f6tb_ complexed with po4, son |
Domain d1s5ze_: 1s5z E: [118872] automated match to d1f6tb_ complexed with po4, son |
Domain d1s5zf_: 1s5z F: [118873] automated match to d1f6tb_ complexed with po4, son |
Domain d3fkba_: 3fkb A: [175849] automated match to d1b4sa_ complexed with edo, gol, mg, tnm, tnv |
Domain d3fkbb_: 3fkb B: [175850] automated match to d1b4sa_ complexed with edo, gol, mg, tnm, tnv |
Domain d3fkbc_: 3fkb C: [175851] automated match to d1b4sa_ complexed with edo, gol, mg, tnm, tnv |
Domain d3fkbd_: 3fkb D: [175852] automated match to d1b4sa_ complexed with edo, gol, mg, tnm, tnv |
Domain d3fkbe_: 3fkb E: [175853] automated match to d1b4sa_ complexed with edo, gol, mg, tnm, tnv |
Domain d3fkbf_: 3fkb F: [175854] automated match to d1b4sa_ complexed with edo, gol, mg, tnm, tnv |
Domain d4c6aa_: 4c6a A: [229058] automated match to d3l7ub_ complexed with peg |
Staphylococcus aureus [TaxId:93062] [196295] (6 PDB entries) |
Domain d3q83a_: 3q83 A: [200289] automated match to d3q83f_ |
Domain d3q83b_: 3q83 B: [200290] automated match to d3q83f_ |
Domain d3q83c_: 3q83 C: [200291] automated match to d3q83f_ |
Domain d3q83d_: 3q83 D: [200292] automated match to d3q83f_ |
Domain d3q83e_: 3q83 E: [200293] automated match to d3q83f_ |
Domain d3q83f_: 3q83 F: [196296] automated match to d2vu5a_ |
Domain d3q86a_: 3q86 A: [215096] automated match to d3q83f_ complexed with gtp, mg |
Domain d3q86b_: 3q86 B: [215097] automated match to d3q83f_ complexed with gtp, mg |
Domain d3q89a_: 3q89 A: [215098] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89b_: 3q89 B: [215099] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89c_: 3q89 C: [215100] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89d_: 3q89 D: [215101] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89e_: 3q89 E: [215102] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89f_: 3q89 F: [215103] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89g_: 3q89 G: [215104] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q89h_: 3q89 H: [215105] automated match to d3q83f_ complexed with cdp, mg |
Domain d3q8ua_: 3q8u A: [215109] automated match to d3q83f_ complexed with adp, mg |
Domain d3q8ub_: 3q8u B: [215110] automated match to d3q83f_ complexed with adp, mg |
Domain d3q8uc_: 3q8u C: [215111] automated match to d3q83f_ complexed with adp, mg |
Domain d3q8ud_: 3q8u D: [215112] automated match to d3q83f_ complexed with adp, mg |
Domain d3q8ue_: 3q8u E: [215113] automated match to d3q83f_ complexed with adp, mg |
Domain d3q8uf_: 3q8u F: [215114] automated match to d3q83f_ complexed with adp, mg |
Domain d3q8va_: 3q8v A: [215115] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8vb_: 3q8v B: [215116] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8vc_: 3q8v C: [215117] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8vd_: 3q8v D: [215118] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8ve_: 3q8v E: [215119] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8vf_: 3q8v F: [215120] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8vg_: 3q8v G: [215121] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8vh_: 3q8v H: [215122] automated match to d3q83f_ complexed with mg, udp |
Domain d3q8ya_: 3q8y A: [215123] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8yb_: 3q8y B: [215124] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8yc_: 3q8y C: [215125] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8yd_: 3q8y D: [215126] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8ye_: 3q8y E: [215127] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8yf_: 3q8y F: [215128] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8yg_: 3q8y G: [215129] automated match to d3q83f_ complexed with adp, mg, vo4 |
Domain d3q8yh_: 3q8y H: [215130] automated match to d3q83f_ complexed with adp, mg, vo4 |
Toxoplasma gondii [TaxId:508771] [230191] (1 PDB entry) |
Domain d4o0na_: 4o0n A: [230192] automated match to d3ngsa_ complexed with so4 |
Domain d4o0nb_: 4o0n B: [235832] automated match to d4o0na_ complexed with so4 |
Domain d4o0nc_: 4o0n C: [235835] automated match to d4o0na_ complexed with so4 |
Domain d4o0nd_: 4o0n D: [235834] automated match to d4o0na_ complexed with so4 |
Domain d4o0ne_: 4o0n E: [235837] automated match to d4o0na_ complexed with so4 |
Domain d4o0nf_: 4o0n F: [235833] automated match to d4o0na_ complexed with so4 |
Domain d4o0ng_: 4o0n G: [235840] automated match to d4o0na_ complexed with so4 |
Domain d4o0nh_: 4o0n H: [235836] automated match to d4o0na_ complexed with so4 |
Domain d4o0ni_: 4o0n I: [235838] automated match to d4o0na_ complexed with so4 |
Domain d4o0nj_: 4o0n J: [235839] automated match to d4o0na_ complexed with so4 |
Domain d4o0nk_: 4o0n K: [235841] automated match to d4o0na_ complexed with so4 |
Domain d4o0nl_: 4o0n L: [235842] automated match to d4o0na_ complexed with so4 |
Timeline for Protein automated matches from d.58.6.1: Nucleoside diphosphate kinase, NDK: