SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2173863Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families) (S)
  5. 2173864Family d.58.6.1: Nucleoside diphosphate kinase, NDK [54920] (2 protein domains)
  6. 2174114Protein automated matches [190032] (16 species)
    not a true protein

Species:

  1. 2174115Acanthamoeba polyphaga mimivirus [TaxId:212035] [188891] (23 PDB entries)
    1. Domains for 3ddi:
      1. 2174132Domain d3ddia1: 3ddi A:2-133 [173834]
        Other proteins in same PDB: d3ddia2, d3ddib2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      2. 2174133Domain d3ddib1: 3ddi B:2-133 [173835]
        Other proteins in same PDB: d3ddia2, d3ddib2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
    2. Domains for 3dkd:
      1. 2174134Domain d3dkda1: 3dkd A:2-133 [174030]
        Other proteins in same PDB: d3dkda2, d3dkdb2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      2. 2174135Domain d3dkdb1: 3dkd B:2-133 [174031]
        Other proteins in same PDB: d3dkda2, d3dkdb2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
    3. Domains for 3ee3:
      1. 2174172Domain d3ee3a1: 3ee3 A:2-129 [174870]
        Other proteins in same PDB: d3ee3a2, d3ee3b2, d3ee3c2, d3ee3d2, d3ee3e2, d3ee3f2
        automated match to d2b8pa1
        complexed with cdp, mg
      2. 2174173Domain d3ee3b1: 3ee3 B:2-129 [174871]
        Other proteins in same PDB: d3ee3a2, d3ee3b2, d3ee3c2, d3ee3d2, d3ee3e2, d3ee3f2
        automated match to d2b8pa1
        complexed with cdp, mg
      3. 2174174Domain d3ee3c1: 3ee3 C:2-131 [174872]
        Other proteins in same PDB: d3ee3a2, d3ee3b2, d3ee3c2, d3ee3d2, d3ee3e2, d3ee3f2
        automated match to d2b8pa1
        complexed with cdp, mg
      4. 2174175Domain d3ee3d1: 3ee3 D:2-131 [174873]
        Other proteins in same PDB: d3ee3a2, d3ee3b2, d3ee3c2, d3ee3d2, d3ee3e2, d3ee3f2
        automated match to d2b8pa1
        complexed with cdp, mg
      5. 2174176Domain d3ee3e1: 3ee3 E:2-131 [174874]
        Other proteins in same PDB: d3ee3a2, d3ee3b2, d3ee3c2, d3ee3d2, d3ee3e2, d3ee3f2
        automated match to d2b8pa1
        complexed with cdp, mg
      6. 2174177Domain d3ee3f1: 3ee3 F:2-129 [174875]
        Other proteins in same PDB: d3ee3a2, d3ee3b2, d3ee3c2, d3ee3d2, d3ee3e2, d3ee3f2
        automated match to d2b8pa1
        complexed with cdp, mg
    4. Domains for 3eic:
      1. 2174146Domain d3eica1: 3eic A:2-131 [174944]
        Other proteins in same PDB: d3eica2, d3eicb2, d3eicc2, d3eicd2, d3eice2, d3eicf2
        automated match to d2b8pa1
        complexed with mg, udp
      2. 2174147Domain d3eicb1: 3eic B:2-130 [174945]
        Other proteins in same PDB: d3eica2, d3eicb2, d3eicc2, d3eicd2, d3eice2, d3eicf2
        automated match to d2b8pa1
        complexed with mg, udp
      3. 2174148Domain d3eicc1: 3eic C:2-131 [174946]
        Other proteins in same PDB: d3eica2, d3eicb2, d3eicc2, d3eicd2, d3eice2, d3eicf2
        automated match to d2b8pa1
        complexed with mg, udp
      4. 2174149Domain d3eicd1: 3eic D:2-131 [174947]
        Other proteins in same PDB: d3eica2, d3eicb2, d3eicc2, d3eicd2, d3eice2, d3eicf2
        automated match to d2b8pa1
        complexed with mg, udp
      5. 2174150Domain d3eice1: 3eic E:2-131 [174948]
        Other proteins in same PDB: d3eica2, d3eicb2, d3eicc2, d3eicd2, d3eice2, d3eicf2
        automated match to d2b8pa1
        complexed with mg, udp
      6. 2174151Domain d3eicf1: 3eic F:2-129 [174949]
        Other proteins in same PDB: d3eica2, d3eicb2, d3eicc2, d3eicd2, d3eice2, d3eicf2
        automated match to d2b8pa1
        complexed with mg, udp
    5. Domains for 3ejm:
      1. 2174138Domain d3ejma1: 3ejm A:2-134 [174986]
        Other proteins in same PDB: d3ejma2, d3ejmb2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      2. 2174139Domain d3ejmb1: 3ejm B:2-134 [174987]
        Other proteins in same PDB: d3ejma2, d3ejmb2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
    6. Domains for 3elh:
      1. 2174166Domain d3elha1: 3elh A:2-131 [175055]
        Other proteins in same PDB: d3elha2, d3elhb2, d3elhc2, d3elhd2, d3elhe2, d3elhf2
        automated match to d2b8pa1
        complexed with dud, mg
      2. 2174167Domain d3elhb1: 3elh B:2-130 [175056]
        Other proteins in same PDB: d3elha2, d3elhb2, d3elhc2, d3elhd2, d3elhe2, d3elhf2
        automated match to d2b8pa1
        complexed with dud, mg
      3. 2174168Domain d3elhc1: 3elh C:2-131 [175057]
        Other proteins in same PDB: d3elha2, d3elhb2, d3elhc2, d3elhd2, d3elhe2, d3elhf2
        automated match to d2b8pa1
        complexed with dud, mg
      4. 2174169Domain d3elhd1: 3elh D:2-131 [175058]
        Other proteins in same PDB: d3elha2, d3elhb2, d3elhc2, d3elhd2, d3elhe2, d3elhf2
        automated match to d2b8pa1
        complexed with dud, mg
      5. 2174170Domain d3elhe1: 3elh E:2-131 [175059]
        Other proteins in same PDB: d3elha2, d3elhb2, d3elhc2, d3elhd2, d3elhe2, d3elhf2
        automated match to d2b8pa1
        complexed with dud, mg
      6. 2174171Domain d3elhf1: 3elh F:2-129 [175060]
        Other proteins in same PDB: d3elha2, d3elhb2, d3elhc2, d3elhd2, d3elhe2, d3elhf2
        automated match to d2b8pa1
        complexed with dud, mg
    7. Domains for 3em1:
      1. 2174118Domain d3em1a1: 3em1 A:2-133 [175071]
        Other proteins in same PDB: d3em1a2, d3em1b2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      2. 2174119Domain d3em1b1: 3em1 B:2-133 [175072]
        Other proteins in same PDB: d3em1a2, d3em1b2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
    8. Domains for 3emt:
      1. 2174122Domain d3emta_: 3emt A: [175090]
        Other proteins in same PDB: d3emtb2
        automated match to d2b8pa1
        complexed with dgi, mg; mutant
      2. 2174123Domain d3emtb1: 3emt B:2-133 [175091]
        Other proteins in same PDB: d3emtb2
        automated match to d2b8pa1
        complexed with dgi, mg; mutant
    9. Domains for 3ena:
      1. 2174120Domain d3enaa1: 3ena A:2-134 [175096]
        Other proteins in same PDB: d3enaa2, d3enab2
        automated match to d2b8pa1
        complexed with dgi, mg; mutant
      2. 2174121Domain d3enab1: 3ena B:2-133 [175097]
        Other proteins in same PDB: d3enaa2, d3enab2
        automated match to d2b8pa1
        complexed with dgi, mg; mutant
    10. Domains for 3etm:
      1. 2174136Domain d3etma_: 3etm A: [175214]
        Other proteins in same PDB: d3etmb2
        automated match to d2b8pa1
        complexed with cdp, mg; mutant
      2. 2174137Domain d3etmb1: 3etm B:2-133 [175215]
        Other proteins in same PDB: d3etmb2
        automated match to d2b8pa1
        complexed with cdp, mg; mutant
    11. Domains for 3evm:
      1. 2174124Domain d3evma1: 3evm A:2-134 [175255]
        Other proteins in same PDB: d3evma2, d3evmb2
        automated match to d2b8pa1
        complexed with mg, yyy; mutant
      2. 2174125Domain d3evmb1: 3evm B:2-133 [175256]
        Other proteins in same PDB: d3evma2, d3evmb2
        automated match to d2b8pa1
        complexed with mg, yyy; mutant
    12. Domains for 3evo:
      1. 2174116Domain d3evoa1: 3evo A:2-133 [175257]
        Other proteins in same PDB: d3evoa2, d3evob2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      2. 2174117Domain d3evob1: 3evo B:2-133 [175258]
        Other proteins in same PDB: d3evoa2, d3evob2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
    13. Domains for 3evw:
      1. 2174196Domain d3evwa1: 3evw A:2-131 [175261]
        Other proteins in same PDB: d3evwa2, d3evwb2, d3evwc2, d3evwd2, d3evwe2, d3evwf2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      2. 2174197Domain d3evwb1: 3evw B:2-130 [175262]
        Other proteins in same PDB: d3evwa2, d3evwb2, d3evwc2, d3evwd2, d3evwe2, d3evwf2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      3. 2174198Domain d3evwc1: 3evw C:2-131 [175263]
        Other proteins in same PDB: d3evwa2, d3evwb2, d3evwc2, d3evwd2, d3evwe2, d3evwf2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      4. 2174199Domain d3evwd1: 3evw D:2-131 [175264]
        Other proteins in same PDB: d3evwa2, d3evwb2, d3evwc2, d3evwd2, d3evwe2, d3evwf2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      5. 2174200Domain d3evwe1: 3evw E:2-131 [175265]
        Other proteins in same PDB: d3evwa2, d3evwb2, d3evwc2, d3evwd2, d3evwe2, d3evwf2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      6. 2174201Domain d3evwf1: 3evw F:2-129 [175266]
        Other proteins in same PDB: d3evwa2, d3evwb2, d3evwc2, d3evwd2, d3evwe2, d3evwf2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
    14. Domains for 3fbb:
      1. 2174154Domain d3fbba1: 3fbb A:2-131 [175637]
        Other proteins in same PDB: d3fbba2, d3fbbb2, d3fbbc2, d3fbbd2, d3fbbe2, d3fbbf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      2. 2174155Domain d3fbbb1: 3fbb B:2-130 [175638]
        Other proteins in same PDB: d3fbba2, d3fbbb2, d3fbbc2, d3fbbd2, d3fbbe2, d3fbbf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      3. 2174156Domain d3fbbc1: 3fbb C:2-131 [175639]
        Other proteins in same PDB: d3fbba2, d3fbbb2, d3fbbc2, d3fbbd2, d3fbbe2, d3fbbf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      4. 2174157Domain d3fbbd1: 3fbb D:2-131 [175640]
        Other proteins in same PDB: d3fbba2, d3fbbb2, d3fbbc2, d3fbbd2, d3fbbe2, d3fbbf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      5. 2174158Domain d3fbbe1: 3fbb E:2-131 [175641]
        Other proteins in same PDB: d3fbba2, d3fbbb2, d3fbbc2, d3fbbd2, d3fbbe2, d3fbbf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      6. 2174159Domain d3fbbf1: 3fbb F:2-129 [175642]
        Other proteins in same PDB: d3fbba2, d3fbbb2, d3fbbc2, d3fbbd2, d3fbbe2, d3fbbf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
    15. Domains for 3fbc:
      1. 2174190Domain d3fbca1: 3fbc A:2-130 [175643]
        Other proteins in same PDB: d3fbca2, d3fbcb2, d3fbcc2, d3fbcd2, d3fbce2, d3fbcf2
        automated match to d2b8pa1
        complexed with mg, po4, tyd; mutant
      2. 2174191Domain d3fbcb1: 3fbc B:2-130 [175644]
        Other proteins in same PDB: d3fbca2, d3fbcb2, d3fbcc2, d3fbcd2, d3fbce2, d3fbcf2
        automated match to d2b8pa1
        complexed with mg, po4, tyd; mutant
      3. 2174192Domain d3fbcc1: 3fbc C:2-131 [175645]
        Other proteins in same PDB: d3fbca2, d3fbcb2, d3fbcc2, d3fbcd2, d3fbce2, d3fbcf2
        automated match to d2b8pa1
        complexed with mg, po4, tyd; mutant
      4. 2174193Domain d3fbcd1: 3fbc D:2-130 [175646]
        Other proteins in same PDB: d3fbca2, d3fbcb2, d3fbcc2, d3fbcd2, d3fbce2, d3fbcf2
        automated match to d2b8pa1
        complexed with mg, po4, tyd; mutant
      5. 2174194Domain d3fbce1: 3fbc E:2-130 [175647]
        Other proteins in same PDB: d3fbca2, d3fbcb2, d3fbcc2, d3fbcd2, d3fbce2, d3fbcf2
        automated match to d2b8pa1
        complexed with mg, po4, tyd; mutant
      6. 2174195Domain d3fbcf1: 3fbc F:2-129 [175648]
        Other proteins in same PDB: d3fbca2, d3fbcb2, d3fbcc2, d3fbcd2, d3fbce2, d3fbcf2
        automated match to d2b8pa1
        complexed with mg, po4, tyd; mutant
    16. Domains for 3fbe:
      1. 2174160Domain d3fbea1: 3fbe A:2-131 [175651]
        Other proteins in same PDB: d3fbea2, d3fbeb2, d3fbec2, d3fbed2, d3fbee2, d3fbef2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      2. 2174161Domain d3fbeb1: 3fbe B:2-129 [175652]
        Other proteins in same PDB: d3fbea2, d3fbeb2, d3fbec2, d3fbed2, d3fbee2, d3fbef2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      3. 2174162Domain d3fbec1: 3fbe C:2-131 [175653]
        Other proteins in same PDB: d3fbea2, d3fbeb2, d3fbec2, d3fbed2, d3fbee2, d3fbef2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      4. 2174163Domain d3fbed1: 3fbe D:2-131 [175654]
        Other proteins in same PDB: d3fbea2, d3fbeb2, d3fbec2, d3fbed2, d3fbee2, d3fbef2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      5. 2174164Domain d3fbee1: 3fbe E:2-131 [175655]
        Other proteins in same PDB: d3fbea2, d3fbeb2, d3fbec2, d3fbed2, d3fbee2, d3fbef2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
      6. 2174165Domain d3fbef1: 3fbe F:2-129 [175656]
        Other proteins in same PDB: d3fbea2, d3fbeb2, d3fbec2, d3fbed2, d3fbee2, d3fbef2
        automated match to d2b8pa1
        complexed with gdp, mg; mutant
    17. Domains for 3fbf:
      1. 2174184Domain d3fbfa1: 3fbf A:2-130 [175657]
        Other proteins in same PDB: d3fbfa2, d3fbfb2, d3fbfc2, d3fbfd2, d3fbfe2, d3fbff2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      2. 2174185Domain d3fbfb1: 3fbf B:2-130 [175658]
        Other proteins in same PDB: d3fbfa2, d3fbfb2, d3fbfc2, d3fbfd2, d3fbfe2, d3fbff2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      3. 2174186Domain d3fbfc1: 3fbf C:2-131 [175659]
        Other proteins in same PDB: d3fbfa2, d3fbfb2, d3fbfc2, d3fbfd2, d3fbfe2, d3fbff2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      4. 2174187Domain d3fbfd1: 3fbf D:2-131 [175660]
        Other proteins in same PDB: d3fbfa2, d3fbfb2, d3fbfc2, d3fbfd2, d3fbfe2, d3fbff2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      5. 2174188Domain d3fbfe1: 3fbf E:2-131 [175661]
        Other proteins in same PDB: d3fbfa2, d3fbfb2, d3fbfc2, d3fbfd2, d3fbfe2, d3fbff2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      6. 2174189Domain d3fbff1: 3fbf F:2-129 [175662]
        Other proteins in same PDB: d3fbfa2, d3fbfb2, d3fbfc2, d3fbfd2, d3fbfe2, d3fbff2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
    18. Domains for 3fc9:
      1. 2174202Domain d3fc9a1: 3fc9 A:2-134 [175675]
        Other proteins in same PDB: d3fc9a2, d3fc9b2, d3fc9c2, d3fc9d2, d3fc9e2, d3fc9f2
        automated match to d2b8pa1
        complexed with cdp, ctp, mg; mutant
      2. 2174203Domain d3fc9b1: 3fc9 B:2-133 [175676]
        Other proteins in same PDB: d3fc9a2, d3fc9b2, d3fc9c2, d3fc9d2, d3fc9e2, d3fc9f2
        automated match to d2b8pa1
        complexed with cdp, ctp, mg; mutant
      3. 2174204Domain d3fc9c1: 3fc9 C:2-133 [175677]
        Other proteins in same PDB: d3fc9a2, d3fc9b2, d3fc9c2, d3fc9d2, d3fc9e2, d3fc9f2
        automated match to d2b8pa1
        complexed with cdp, ctp, mg; mutant
      4. 2174205Domain d3fc9d1: 3fc9 D:2-134 [175678]
        Other proteins in same PDB: d3fc9a2, d3fc9b2, d3fc9c2, d3fc9d2, d3fc9e2, d3fc9f2
        automated match to d2b8pa1
        complexed with cdp, ctp, mg; mutant
      5. 2174206Domain d3fc9e1: 3fc9 E:2-133 [175679]
        Other proteins in same PDB: d3fc9a2, d3fc9b2, d3fc9c2, d3fc9d2, d3fc9e2, d3fc9f2
        automated match to d2b8pa1
        complexed with cdp, ctp, mg; mutant
      6. 2174207Domain d3fc9f1: 3fc9 F:2-133 [175680]
        Other proteins in same PDB: d3fc9a2, d3fc9b2, d3fc9c2, d3fc9d2, d3fc9e2, d3fc9f2
        automated match to d2b8pa1
        complexed with cdp, ctp, mg; mutant
    19. Domains for 3fcv:
      1. 2174152Domain d3fcva1: 3fcv A:2-134 [175693]
        Other proteins in same PDB: d3fcva2, d3fcvb2
        automated match to d2b8pa1
        complexed with dud, mg; mutant
      2. 2174153Domain d3fcvb1: 3fcv B:2-133 [175694]
        Other proteins in same PDB: d3fcva2, d3fcvb2
        automated match to d2b8pa1
        complexed with dud, mg; mutant
    20. Domains for 3fcw:
      1. 2174178Domain d3fcwa1: 3fcw A:2-130 [175695]
        Other proteins in same PDB: d3fcwa2, d3fcwb2, d3fcwc2, d3fcwd2, d3fcwe2, d3fcwf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      2. 2174179Domain d3fcwb1: 3fcw B:2-128 [175696]
        Other proteins in same PDB: d3fcwa2, d3fcwb2, d3fcwc2, d3fcwd2, d3fcwe2, d3fcwf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      3. 2174180Domain d3fcwc1: 3fcw C:2-131 [175697]
        Other proteins in same PDB: d3fcwa2, d3fcwb2, d3fcwc2, d3fcwd2, d3fcwe2, d3fcwf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      4. 2174181Domain d3fcwd1: 3fcw D:2-130 [175698]
        Other proteins in same PDB: d3fcwa2, d3fcwb2, d3fcwc2, d3fcwd2, d3fcwe2, d3fcwf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      5. 2174182Domain d3fcwe1: 3fcw E:2-130 [175699]
        Other proteins in same PDB: d3fcwa2, d3fcwb2, d3fcwc2, d3fcwd2, d3fcwe2, d3fcwf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
      6. 2174183Domain d3fcwf1: 3fcw F:2-129 [175700]
        Other proteins in same PDB: d3fcwa2, d3fcwb2, d3fcwc2, d3fcwd2, d3fcwe2, d3fcwf2
        automated match to d2b8pa1
        complexed with mg, udp; mutant
    21. Domains for 3g2x:
      1. 2174208Domain d3g2xa_: 3g2x A: [176308]
        Other proteins in same PDB: d3g2xc2, d3g2xe2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      2. 2174209Domain d3g2xb_: 3g2x B: [176309]
        Other proteins in same PDB: d3g2xc2, d3g2xe2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      3. 2174210Domain d3g2xc1: 3g2x C:2-133 [176310]
        Other proteins in same PDB: d3g2xc2, d3g2xe2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      4. 2174211Domain d3g2xd_: 3g2x D: [176311]
        Other proteins in same PDB: d3g2xc2, d3g2xe2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      5. 2174212Domain d3g2xe1: 3g2x E:2-133 [176312]
        Other proteins in same PDB: d3g2xc2, d3g2xe2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
      6. 2174213Domain d3g2xf_: 3g2x F: [176313]
        Other proteins in same PDB: d3g2xc2, d3g2xe2
        automated match to d2b8pa1
        complexed with mg, tyd; mutant
    22. Domains for 3gp9:
      1. 2174126Domain d3gp9a1: 3gp9 A:2-131 [176804]
        Other proteins in same PDB: d3gp9a2, d3gp9b2, d3gp9c2, d3gp9d2, d3gp9e2, d3gp9f2
        automated match to d2b8pa1
        complexed with gdp, mg, po4
      2. 2174127Domain d3gp9b1: 3gp9 B:2-130 [176805]
        Other proteins in same PDB: d3gp9a2, d3gp9b2, d3gp9c2, d3gp9d2, d3gp9e2, d3gp9f2
        automated match to d2b8pa1
        complexed with gdp, mg, po4
      3. 2174128Domain d3gp9c1: 3gp9 C:2-131 [176806]
        Other proteins in same PDB: d3gp9a2, d3gp9b2, d3gp9c2, d3gp9d2, d3gp9e2, d3gp9f2
        automated match to d2b8pa1
        complexed with gdp, mg, po4
      4. 2174129Domain d3gp9d1: 3gp9 D:2-130 [176807]
        Other proteins in same PDB: d3gp9a2, d3gp9b2, d3gp9c2, d3gp9d2, d3gp9e2, d3gp9f2
        automated match to d2b8pa1
        complexed with gdp, mg, po4
      5. 2174130Domain d3gp9e1: 3gp9 E:2-131 [176808]
        Other proteins in same PDB: d3gp9a2, d3gp9b2, d3gp9c2, d3gp9d2, d3gp9e2, d3gp9f2
        automated match to d2b8pa1
        complexed with gdp, mg, po4
      6. 2174131Domain d3gp9f1: 3gp9 F:2-129 [176809]
        Other proteins in same PDB: d3gp9a2, d3gp9b2, d3gp9c2, d3gp9d2, d3gp9e2, d3gp9f2
        automated match to d2b8pa1
        complexed with gdp, mg, po4
    23. Domains for 3gpa:
      1. 2174140Domain d3gpaa1: 3gpa A:2-130 [176810]
        Other proteins in same PDB: d3gpaa2, d3gpab2, d3gpac2, d3gpad2, d3gpae2, d3gpaf2
        automated match to d2b8pa1
        complexed with cdp, mg, po4; mutant
      2. 2174141Domain d3gpab1: 3gpa B:2-130 [176811]
        Other proteins in same PDB: d3gpaa2, d3gpab2, d3gpac2, d3gpad2, d3gpae2, d3gpaf2
        automated match to d2b8pa1
        complexed with cdp, mg, po4; mutant
      3. 2174142Domain d3gpac1: 3gpa C:2-130 [176812]
        Other proteins in same PDB: d3gpaa2, d3gpab2, d3gpac2, d3gpad2, d3gpae2, d3gpaf2
        automated match to d2b8pa1
        complexed with cdp, mg, po4; mutant
      4. 2174143Domain d3gpad1: 3gpa D:2-130 [176813]
        Other proteins in same PDB: d3gpaa2, d3gpab2, d3gpac2, d3gpad2, d3gpae2, d3gpaf2
        automated match to d2b8pa1
        complexed with cdp, mg, po4; mutant
      5. 2174144Domain d3gpae1: 3gpa E:2-129 [176814]
        Other proteins in same PDB: d3gpaa2, d3gpab2, d3gpac2, d3gpad2, d3gpae2, d3gpaf2
        automated match to d2b8pa1
        complexed with cdp, mg, po4; mutant
      6. 2174145Domain d3gpaf1: 3gpa F:2-129 [176815]
        Other proteins in same PDB: d3gpaa2, d3gpab2, d3gpac2, d3gpad2, d3gpae2, d3gpaf2
        automated match to d2b8pa1
        complexed with cdp, mg, po4; mutant
  2. 2174214Acinetobacter baumannii [TaxId:509170] [273931] (1 PDB entry)
  3. 2174216Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [188810] (1 PDB entry)
  4. 2174218Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255759] (1 PDB entry)
  5. 2174221Burkholderia thailandensis [TaxId:271848] [193397] (3 PDB entries)
    1. Domains for 4dut:
      1. 2174226Domain d4duta_: 4dut A: [220043]
        automated match to d4hr2b_
        complexed with cl, so4
      2. 2174227Domain d4dutb_: 4dut B: [220044]
        automated match to d4hr2b_
        complexed with cl, so4
    2. Domains for 4ek2:
      1. 2174224Domain d4ek2a1: 4ek2 A:1-141 [220588]
        Other proteins in same PDB: d4ek2a2
        automated match to d4hr2b_
        complexed with cl, da, dms, edo
      2. 2174225Domain d4ek2b_: 4ek2 B: [220589]
        Other proteins in same PDB: d4ek2a2
        automated match to d4hr2b_
        complexed with cl, da, dms, edo
    3. Domains for 4hr2:
      1. 2174222Domain d4hr2a1: 4hr2 A:1-141 [202456]
        Other proteins in same PDB: d4hr2a2
        automated match to d4hr2b_
        complexed with adp
      2. 2174223Domain d4hr2b_: 4hr2 B: [193398]
        Other proteins in same PDB: d4hr2a2
        automated match to d3pj9d_
        complexed with adp
  6. 2174228Campylobacter jejuni [TaxId:192222] [189538] (1 PDB entry)
  7. 2174233Fruit fly (Drosophila melanogaster) [TaxId:7227] [273749] (1 PDB entry)
  8. 2174237Giardia lamblia [TaxId:184922] [189932] (1 PDB entry)
  9. 2174239Leishmania braziliensis [TaxId:5660] [257801] (1 PDB entry)
  10. 2174242Leishmania major [TaxId:5664] [189935] (7 PDB entries)
    1. Domain for 3ngr:
    2. Domains for 3ngs:
      1. 2174243Domain d3ngsa_: 3ngs A: [182265]
        automated match to d1nuea_
        complexed with dtt, po4
      2. 2174244Domain d3ngsb_: 3ngs B: [182266]
        automated match to d1nuea_
        complexed with dtt, po4
      3. 2174245Domain d3ngsc_: 3ngs C: [182267]
        automated match to d1nuea_
        complexed with dtt, po4
    3. Domains for 3ngt:
      1. 2174248Domain d3ngta_: 3ngt A: [182268]
        automated match to d1nuea_
        complexed with amp
      2. 2174249Domain d3ngtb_: 3ngt B: [182269]
        automated match to d1nuea_
        complexed with amp
      3. 2174250Domain d3ngtc_: 3ngt C: [182270]
        automated match to d1nuea_
        complexed with amp
      4. 2174251Domain d3ngtd_: 3ngt D: [182271]
        automated match to d1nuea_
        complexed with amp
      5. 2174252Domain d3ngte_: 3ngt E: [182272]
        automated match to d1nuea_
        complexed with amp
      6. 2174253Domain d3ngtf_: 3ngt F: [182273]
        automated match to d1nuea_
        complexed with amp
      7. 2174254Domain d3ngtg_: 3ngt G: [182274]
        automated match to d1nuea_
        complexed with amp
      8. 2174255Domain d3ngth_: 3ngt H: [182275]
        automated match to d1nuea_
        complexed with amp
      9. 2174256Domain d3ngti_: 3ngt I: [182276]
        automated match to d1nuea_
        complexed with amp
      10. 2174257Domain d3ngtj_: 3ngt J: [182277]
        automated match to d1nuea_
        complexed with amp
      11. 2174258Domain d3ngtk_: 3ngt K: [182278]
        automated match to d1nuea_
        complexed with amp
      12. 2174259Domain d3ngtl_: 3ngt L: [182279]
        automated match to d1nuea_
        complexed with amp
      13. 2174260Domain d3ngtm_: 3ngt M: [182280]
        automated match to d1nuea_
        complexed with amp
      14. 2174261Domain d3ngtn_: 3ngt N: [182281]
        automated match to d1nuea_
        complexed with amp
    4. Domains for 3ngu:
      1. 2174246Domain d3ngua_: 3ngu A: [182282]
        automated match to d1nuea_
        complexed with adp
      2. 2174247Domain d3ngub_: 3ngu B: [182283]
        automated match to d1nuea_
        complexed with adp
    5. Domains for 5c7p:
      1. 2174267Domain d5c7pa_: 5c7p A: [278034]
        automated match to d1zs6a1
        mutant
      2. 2174268Domain d5c7pb_: 5c7p B: [278032]
        automated match to d1zs6a1
        mutant
      3. 2174269Domain d5c7pc_: 5c7p C: [278033]
        automated match to d1zs6a1
        mutant
    6. Domains for 5caa:
      1. 2174262Domain d5caaa_: 5caa A: [278039]
        automated match to d3ngsa_
        mutant
      2. 2174263Domain d5caab_: 5caa B: [278042]
        automated match to d3ngsa_
        mutant
    7. Domains for 5cab:
      1. 2174264Domain d5caba_: 5cab A: [278043]
        automated match to d3ngsa_
        complexed with so4; mutant
      2. 2174265Domain d5cabb_: 5cab B: [278044]
        automated match to d3ngsa_
        complexed with so4; mutant
  11. 2174270Pyrococcus horikoshii OT3 [TaxId:70601] [187576] (1 PDB entry)
  12. 2174272Rice (Oryza sativa) [TaxId:4530] [186751] (1 PDB entry)
  13. 2174284Slime mold (Dictyostelium discoideum) [TaxId:44689] [186756] (3 PDB entries)
    1. Domains for 1s5z:
      1. 2174292Domain d1s5za_: 1s5z A: [118868]
        automated match to d1f6tb_
        complexed with po4, son
      2. 2174293Domain d1s5zb_: 1s5z B: [118869]
        automated match to d1f6tb_
        complexed with po4, son
      3. 2174294Domain d1s5zc_: 1s5z C: [118870]
        automated match to d1f6tb_
        complexed with po4, son
      4. 2174295Domain d1s5zd_: 1s5z D: [118871]
        automated match to d1f6tb_
        complexed with po4, son
      5. 2174296Domain d1s5ze_: 1s5z E: [118872]
        automated match to d1f6tb_
        complexed with po4, son
      6. 2174297Domain d1s5zf_: 1s5z F: [118873]
        automated match to d1f6tb_
        complexed with po4, son
    2. Domains for 3fkb:
      1. 2174286Domain d3fkba_: 3fkb A: [175849]
        automated match to d1b4sa_
        complexed with edo, gol, mg, tnm, tnv
      2. 2174287Domain d3fkbb_: 3fkb B: [175850]
        automated match to d1b4sa_
        complexed with edo, gol, mg, tnm, tnv
      3. 2174288Domain d3fkbc_: 3fkb C: [175851]
        automated match to d1b4sa_
        complexed with edo, gol, mg, tnm, tnv
      4. 2174289Domain d3fkbd_: 3fkb D: [175852]
        automated match to d1b4sa_
        complexed with edo, gol, mg, tnm, tnv
      5. 2174290Domain d3fkbe_: 3fkb E: [175853]
        automated match to d1b4sa_
        complexed with edo, gol, mg, tnm, tnv
      6. 2174291Domain d3fkbf_: 3fkb F: [175854]
        automated match to d1b4sa_
        complexed with edo, gol, mg, tnm, tnv
    3. Domain for 4c6a:
  14. 2174298Staphylococcus aureus [TaxId:93062] [196295] (6 PDB entries)
    1. Domains for 3q83:
      1. 2174307Domain d3q83a_: 3q83 A: [200289]
        automated match to d3q83f_
      2. 2174308Domain d3q83b_: 3q83 B: [200290]
        automated match to d3q83f_
      3. 2174309Domain d3q83c_: 3q83 C: [200291]
        automated match to d3q83f_
      4. 2174310Domain d3q83d_: 3q83 D: [200292]
        automated match to d3q83f_
      5. 2174311Domain d3q83e_: 3q83 E: [200293]
        automated match to d3q83f_
      6. 2174312Domain d3q83f_: 3q83 F: [196296]
        automated match to d2vu5a_
    2. Domains for 3q86:
      1. 2174299Domain d3q86a_: 3q86 A: [215096]
        automated match to d3q83f_
        complexed with gtp, mg
      2. 2174300Domain d3q86b_: 3q86 B: [215097]
        automated match to d3q83f_
        complexed with gtp, mg
    3. Domains for 3q89:
      1. 2174329Domain d3q89a_: 3q89 A: [215098]
        automated match to d3q83f_
        complexed with cdp, mg
      2. 2174330Domain d3q89b_: 3q89 B: [215099]
        automated match to d3q83f_
        complexed with cdp, mg
      3. 2174331Domain d3q89c_: 3q89 C: [215100]
        automated match to d3q83f_
        complexed with cdp, mg
      4. 2174332Domain d3q89d_: 3q89 D: [215101]
        automated match to d3q83f_
        complexed with cdp, mg
      5. 2174333Domain d3q89e_: 3q89 E: [215102]
        automated match to d3q83f_
        complexed with cdp, mg
      6. 2174334Domain d3q89f_: 3q89 F: [215103]
        automated match to d3q83f_
        complexed with cdp, mg
      7. 2174335Domain d3q89g_: 3q89 G: [215104]
        automated match to d3q83f_
        complexed with cdp, mg
      8. 2174336Domain d3q89h_: 3q89 H: [215105]
        automated match to d3q83f_
        complexed with cdp, mg
    4. Domains for 3q8u:
      1. 2174301Domain d3q8ua_: 3q8u A: [215109]
        automated match to d3q83f_
        complexed with adp, mg
      2. 2174302Domain d3q8ub_: 3q8u B: [215110]
        automated match to d3q83f_
        complexed with adp, mg
      3. 2174303Domain d3q8uc_: 3q8u C: [215111]
        automated match to d3q83f_
        complexed with adp, mg
      4. 2174304Domain d3q8ud_: 3q8u D: [215112]
        automated match to d3q83f_
        complexed with adp, mg
      5. 2174305Domain d3q8ue_: 3q8u E: [215113]
        automated match to d3q83f_
        complexed with adp, mg
      6. 2174306Domain d3q8uf_: 3q8u F: [215114]
        automated match to d3q83f_
        complexed with adp, mg
    5. Domains for 3q8v:
      1. 2174313Domain d3q8va_: 3q8v A: [215115]
        automated match to d3q83f_
        complexed with mg, udp
      2. 2174314Domain d3q8vb_: 3q8v B: [215116]
        automated match to d3q83f_
        complexed with mg, udp
      3. 2174315Domain d3q8vc_: 3q8v C: [215117]
        automated match to d3q83f_
        complexed with mg, udp
      4. 2174316Domain d3q8vd_: 3q8v D: [215118]
        automated match to d3q83f_
        complexed with mg, udp
      5. 2174317Domain d3q8ve_: 3q8v E: [215119]
        automated match to d3q83f_
        complexed with mg, udp
      6. 2174318Domain d3q8vf_: 3q8v F: [215120]
        automated match to d3q83f_
        complexed with mg, udp
      7. 2174319Domain d3q8vg_: 3q8v G: [215121]
        automated match to d3q83f_
        complexed with mg, udp
      8. 2174320Domain d3q8vh_: 3q8v H: [215122]
        automated match to d3q83f_
        complexed with mg, udp
    6. Domains for 3q8y:
      1. 2174321Domain d3q8ya_: 3q8y A: [215123]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      2. 2174322Domain d3q8yb_: 3q8y B: [215124]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      3. 2174323Domain d3q8yc_: 3q8y C: [215125]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      4. 2174324Domain d3q8yd_: 3q8y D: [215126]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      5. 2174325Domain d3q8ye_: 3q8y E: [215127]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      6. 2174326Domain d3q8yf_: 3q8y F: [215128]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      7. 2174327Domain d3q8yg_: 3q8y G: [215129]
        automated match to d3q83f_
        complexed with adp, mg, vo4
      8. 2174328Domain d3q8yh_: 3q8y H: [215130]
        automated match to d3q83f_
        complexed with adp, mg, vo4
  15. 2174337Toxoplasma gondii [TaxId:508771] [230191] (2 PDB entries)
    1. Domains for 4o0n:
      1. 2174350Domain d4o0na_: 4o0n A: [230192]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d3ngsa_
        complexed with so4
      2. 2174351Domain d4o0nb1: 4o0n B:3-155 [235832]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      3. 2174352Domain d4o0nc_: 4o0n C: [235835]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      4. 2174353Domain d4o0nd1: 4o0n D:3-155 [235834]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      5. 2174354Domain d4o0ne1: 4o0n E:3-155 [235837]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      6. 2174355Domain d4o0nf1: 4o0n F:3-155 [235833]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      7. 2174356Domain d4o0ng_: 4o0n G: [235840]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      8. 2174357Domain d4o0nh_: 4o0n H: [235836]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      9. 2174358Domain d4o0ni_: 4o0n I: [235838]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      10. 2174359Domain d4o0nj_: 4o0n J: [235839]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      11. 2174360Domain d4o0nk_: 4o0n K: [235841]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
      12. 2174361Domain d4o0nl_: 4o0n L: [235842]
        Other proteins in same PDB: d4o0nb2, d4o0nd2, d4o0ne2, d4o0nf2
        automated match to d4o0na_
        complexed with so4
    2. Domains for 5bxi:
      1. 2174338Domain d5bxia_: 5bxi A: [274198]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      2. 2174339Domain d5bxib_: 5bxi B: [274190]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      3. 2174340Domain d5bxic_: 5bxi C: [274194]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      4. 2174341Domain d5bxid1: 5bxi D:3-155 [274199]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      5. 2174342Domain d5bxie_: 5bxi E: [274195]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      6. 2174343Domain d5bxif_: 5bxi F: [274201]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      7. 2174344Domain d5bxig1: 5bxi G:3-155 [274197]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      8. 2174345Domain d5bxih_: 5bxi H: [274192]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      9. 2174346Domain d5bxii_: 5bxi I: [274196]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      10. 2174347Domain d5bxij_: 5bxi J: [274200]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      11. 2174348Domain d5bxik_: 5bxi K: [274191]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
      12. 2174349Domain d5bxil_: 5bxi L: [274193]
        Other proteins in same PDB: d5bxid2, d5bxig2
        automated match to d4o0nb_
        complexed with bct, peg
  16. 2287358Schistosoma mansoni [TaxId:6183] [330659] (1 PDB entry)

More info for Protein automated matches from d.58.6.1: Nucleoside diphosphate kinase, NDK

Timeline for Protein automated matches from d.58.6.1: Nucleoside diphosphate kinase, NDK: