SCOPe 2.08: Protein: alpha-Lactalbumin

Lineage for Protein: alpha-Lactalbumin

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.2: Lysozyme-like [53954] (1 superfamily)
common alpha+beta motif for the active site region
Superfamily d.2.1: Lysozyme-like [53955] (12 families)
Family d.2.1.2: C-type lysozyme [53960] (3 proteins)
automatically mapped to Pfam PF00062
Protein alpha-Lactalbumin [53975] (6 species)
expressed only in the lactating mammary gland, strongly binds calcium ion

Species:

Cow (Bos taurus) [TaxId:9913] [53980] (4 PDB entries)
1. Domains for 1f6r:
  1. Domain d1f6ra_: 1f6r A: [36606]
  2. Domain d1f6rb_: 1f6r B: [36607]
  3. Domain d1f6rc_: 1f6r C: [36608]
  4. Domain d1f6rd_: 1f6r D: [36609]
  5. Domain d1f6re_: 1f6r E: [36610]
  6. Domain d1f6rf_: 1f6r F: [36611]
2. Domains for 1f6s:
  1. Domain d1f6sa_: 1f6s A: [36612]
    complexed with ca
  2. Domain d1f6sb_: 1f6s B: [36613]
    complexed with ca
  3. Domain d1f6sc_: 1f6s C: [36614]
    complexed with ca
  4. Domain d1f6sd_: 1f6s D: [36615]
    complexed with ca
  5. Domain d1f6se_: 1f6s E: [36616]
    complexed with ca
  6. Domain d1f6sf_: 1f6s F: [36617]
    complexed with ca
3. Domains for 1hfz:
  1. Domain d1hfza_: 1hfz A: [36618]
    complexed with ca
  2. Domain d1hfzb_: 1hfz B: [36619]
    complexed with ca
  3. Domain d1hfzc_: 1hfz C: [36620]
    complexed with ca
  4. Domain d1hfzd_: 1hfz D: [36621]
    complexed with ca
4. Domain for 6ip9:
  - Domain d6ip9a_: 6ip9 A: [365123]
    automated match to d1f6sa_
    complexed with gol, la, so4
Goat (Capra hircus) [TaxId:9925] [53979] (5 PDB entries)
1. Domain for 1fkq:
  - Domain d1fkqa1: 1fkq A:1-123 [36601]
    Other proteins in same PDB: d1fkqa2
    complexed with ca
2. Domain for 1fkv:
  - Domain d1fkva_: 1fkv A: [36602]
    complexed with ca
3. Domains for 1hfy:
  1. Domain d1hfya_: 1hfy A: [36604]
    complexed with ca
  2. Domain d1hfyb_: 1hfy B: [36605]
    complexed with ca
4. Domain for 1hmk:
  - Domain d1hmka_: 1hmk A: [36603]
    complexed with ca
5. Domains for 3b0k:
  1. Domain d3b0ka1: 3b0k A:2-120 [195187]
    Other proteins in same PDB: d3b0ka2, d3b0kb2
    automated match to d1fkqa_
    complexed with ca
  2. Domain d3b0kb1: 3b0k B:2-120 [195186]
    Other proteins in same PDB: d3b0ka2, d3b0kb2
    automated match to d1fkqa_
    complexed with ca
Guinea pig (Cavia porcellus) [TaxId:10141] [53978] (1 PDB entry)
- Domain for 1hfx:
  - Domain d1hfxa_: 1hfx A: [36600]
    complexed with ca
Human (Homo sapiens) [TaxId:9606] [53977] (3 PDB entries)
1. Domain for 1a4v:
  - Domain d1a4va_: 1a4v A: [36599]
    complexed with ca
2. Domain for 1b9o:
  - Domain d1b9oa_: 1b9o A: [36597]
    complexed with ca
3. Domain for 1hml:
  - Domain d1hmla_: 1hml A: [36598]
    complexed with ca, so4, zn
Mouse (Mus musculus) [TaxId:10090] [69628] (14 PDB entries)
1. Domains for 1l7w:
  1. Domain d1l7wa_: 1l7w A: [302660]
    Other proteins in same PDB: d1l7wb1, d1l7wb2, d1l7wd_
    automated match to d1nmma_
    complexed with ca, mn, ud2
  2. Domain d1l7wc_: 1l7w C: [302663]
    Other proteins in same PDB: d1l7wb1, d1l7wb2, d1l7wd_
    automated match to d1nmma_
    complexed with ca, mn, ud2
2. Domains for 1nf5:
  1. Domain d1nf5a_: 1nf5 A: [80453]
    Other proteins in same PDB: d1nf5b_, d1nf5d_
    complexed with bgc, ca, edo, pg4
  2. Domain d1nf5c_: 1nf5 C: [80455]
    Other proteins in same PDB: d1nf5b_, d1nf5d_
    complexed with bgc, ca, edo, pg4
3. Domains for 1nhe:
  1. Domain d1nhea_: 1nhe A: [80512]
    Other proteins in same PDB: d1nheb_, d1nhed_
    complexed with ca, pg4, udp
  2. Domain d1nhec_: 1nhe C: [80514]
    Other proteins in same PDB: d1nheb_, d1nhed_
    complexed with ca, pg4, udp
4. Domains for 1nkh:
  1. Domain d1nkha_: 1nkh A: [80563]
    Other proteins in same PDB: d1nkhb_, d1nkhd_
    complexed with ca, mn, pg4, so4, udp
  2. Domain d1nkhc_: 1nkh C: [80565]
    Other proteins in same PDB: d1nkhb_, d1nkhd_
    complexed with ca, mn, pg4, so4, udp
5. Domains for 1nmm:
  1. Domain d1nmma_: 1nmm A: [80661]
    Other proteins in same PDB: d1nmmb_, d1nmmd_
    complexed with ca, nag, pg4; mutant
  2. Domain d1nmmc_: 1nmm C: [80663]
    Other proteins in same PDB: d1nmmb_, d1nmmd_
    complexed with ca, nag, pg4; mutant
6. Domains for 1nqi:
  1. Domain d1nqia_: 1nqi A: [80690]
    Other proteins in same PDB: d1nqib_, d1nqid_
    complexed with ca, nag
  2. Domain d1nqic_: 1nqi C: [80692]
    Other proteins in same PDB: d1nqib_, d1nqid_
    complexed with ca, nag
7. Domains for 1nt7:
  1. Domain d1nt7a_: 1nt7 A: [302782]
    Other proteins in same PDB: d1nt7b_, d1nt7d_
    automated match to d1nmma_
    complexed with ca, gdu, mes, mn, pg4, udp
  2. Domain d1nt7c_: 1nt7 C: [302784]
    Other proteins in same PDB: d1nt7b_, d1nt7d_
    automated match to d1nmma_
    complexed with ca, gdu, mes, mn, pg4, udp
8. Domains for 1nwg:
  1. Domain d1nwga_: 1nwg A: [80737]
    Other proteins in same PDB: d1nwgb_, d1nwgd_
    complexed with bgn, ca
  2. Domain d1nwgc_: 1nwg C: [80739]
    Other proteins in same PDB: d1nwgb_, d1nwgd_
    complexed with bgn, ca
9. Domains for 1o23:
  1. Domain d1o23a_: 1o23 A: [81079]
    Other proteins in same PDB: d1o23b_, d1o23d_
    complexed with ca, mes, mn, pg4, udp, upg
  2. Domain d1o23c_: 1o23 C: [81081]
    Other proteins in same PDB: d1o23b_, d1o23d_
    complexed with ca, mes, mn, pg4, udp, upg
10. Domains for 1oqm:
  1. Domain d1oqma_: 1oqm A: [87309]
    Other proteins in same PDB: d1oqmb_, d1oqmd_
    complexed with ca, mn, pg4, ud2
  2. Domain d1oqmc_: 1oqm C: [87311]
    Other proteins in same PDB: d1oqmb_, d1oqmd_
    complexed with ca, mn, pg4, ud2
11. Domains for 1pzy:
  1. Domain d1pzya_: 1pzy A: [95486]
    Other proteins in same PDB: d1pzyb_, d1pzyd_
    complexed with ca, mn, nag, udp
  2. Domain d1pzyc_: 1pzy C: [95488]
    Other proteins in same PDB: d1pzyb_, d1pzyd_
    complexed with ca, mn, nag, udp
12. Domains for 1yro:
  1. Domain d1yroa_: 1yro A: [123931]
    Other proteins in same PDB: d1yrob1, d1yrod_
    automated match to d1nf5a_
    complexed with ca, gdu, mes, mn, pg4, udp; mutant
  2. Domain d1yroc_: 1yro C: [123933]
    Other proteins in same PDB: d1yrob1, d1yrod_
    automated match to d1nf5a_
    complexed with ca, gdu, mes, mn, pg4, udp; mutant
13. Domains for 2fyc:
  1. Domain d2fyca_: 2fyc A: [134361]
    Other proteins in same PDB: d2fycb1, d2fycd_
    automated match to d1nf5a_
    complexed with ca, gdu, mes, udp
  2. Domain d2fycc_: 2fyc C: [134363]
    Other proteins in same PDB: d2fycb1, d2fycd_
    automated match to d1nf5a_
    complexed with ca, gdu, mes, udp
14. Domains for 2fyd:
  1. Domain d2fyda_: 2fyd A: [134365]
    Other proteins in same PDB: d2fydb1, d2fydd_
    automated match to d1nf5a_
    complexed with bgc, ca, mes, mn, nga, pg4, udp
  2. Domain d2fydc_: 2fyd C: [134367]
    Other proteins in same PDB: d2fydb1, d2fydd_
    automated match to d1nf5a_
    complexed with bgc, ca, mes, mn, nga, pg4, udp
Yellow baboon (Papio cynocephalus) [TaxId:9556] [53976] (1 PDB entry)
- Domain for 1alc:
  - Domain d1alca_: 1alc A: [36596]
    complexed with ca

More info for Protein alpha-Lactalbumin from d.2.1.2: C-type lysozyme

Timeline for Protein alpha-Lactalbumin from d.2.1.2: C-type lysozyme:

Protein alpha-Lactalbumin from d.2.1.2: C-type lysozyme first appeared (with stable ids) in SCOP 1.55
Protein alpha-Lactalbumin from d.2.1.2: C-type lysozyme appears in SCOPe 2.07