Lineage for Family d.2.1.2: C-type lysozyme

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. Family d.2.1.2: C-type lysozyme [53960] (3 proteins)
    automatically mapped to Pfam PF00062

Proteins:

  1. alpha-Lactalbumin [53975] (6 species)
    expressed only in the lactating mammary gland, strongly binds calcium ion
    1. Species Cow (Bos taurus) [TaxId:9913] [53980] (4 PDB entries)
    2. Species Goat (Capra hircus) [TaxId:9925] [53979] (5 PDB entries)
    3. Species Guinea pig (Cavia porcellus) [TaxId:10141] [53978] (1 PDB entry)
    4. Species Human (Homo sapiens) [TaxId:9606] [53977] (3 PDB entries)
    5. Species Mouse (Mus musculus) [TaxId:10090] [69628] (14 PDB entries)
    6. Species Yellow baboon (Papio cynocephalus) [TaxId:9556] [53976] (1 PDB entry)
  2. Lysozyme [53961] (15 species)
    ubiquitous in a variety of tissues and secretions
    1. Species Australian echidna (Tachyglossus aculeatus) [TaxId:9261] [53972] (1 PDB entry)
    2. Species Bobwhite quail (Colinus virginianus) [TaxId:9014] [53966] (3 PDB entries)
    3. Species Chicken (Gallus gallus) [TaxId:9031] [53962] (887 PDB entries)
      Uniprot P00698
    4. Species Dog (Canis familiaris), milk [TaxId:9615] [53971] (4 PDB entries)
    5. Species Guinea fowl (Numida meleagris) [TaxId:8996] [53964] (2 PDB entries)
    6. Species Horse (Equus caballus), milk [TaxId:9796] [53970] (1 PDB entry)
    7. Species Human (Homo sapiens) [TaxId:9606] [53969] (203 PDB entries)
      Uniprot P00695
    8. Species Japanese quail (Coturnix coturnix japonica) [TaxId:93934] [53967] (1 PDB entry)
    9. Species Mouse (Mus musculus) [TaxId:10090] [75329] (1 PDB entry)
    10. Species Opisthocomus hoazin [TaxId:30419] [377162] (2 PDB entries)
    11. Species Pheasant (Phasianus colchicus) [TaxId:9054] [53965] (2 PDB entries)
    12. Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [53973] (7 PDB entries)
    13. Species Silkworm (Bombyx mori) [TaxId:7091] [64201] (1 PDB entry)
    14. Species Tasar silkworm (Antheraea mylitta) [TaxId:34739] [69627] (1 PDB entry)
      induced antibacterial protein
    15. Species Turkey (Meleagris gallopavo) [TaxId:9103] [53963] (13 PDB entries)
  3. automated matches [190299] (8 species)
    not a true protein
    1. Species Chicken (Gallus gallus) [TaxId:9031] [196365] (37 PDB entries)
    2. Species Cow (Bos taurus) [TaxId:9913] [187106] (2 PDB entries)
    3. Species Dog (Canis familiaris) [TaxId:9615] [188283] (1 PDB entry)
    4. Species Duck (Anas platyrhynchos) [TaxId:8839] [341650] (7 PDB entries)
    5. Species Donkey (Equus asinus) [TaxId:9793] [354124] (1 PDB entry)
    6. Species Human (Homo sapiens) [TaxId:9606] [188701] (6 PDB entries)
    7. Species Mus musculus [311150] (7 PDB entries)
    8. Species Pelodiscus sinensis [TaxId:13735] [187773] (1 PDB entry)

More info for Family d.2.1.2: C-type lysozyme

Timeline for Family d.2.1.2: C-type lysozyme: