Lineage for Family d.2.1.2: C-type lysozyme

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2495000Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 2495001Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 2495039Family d.2.1.2: C-type lysozyme [53960] (3 protein domains)
    automatically mapped to Pfam PF00062

Protein Domains:

  1. 2495040alpha-Lactalbumin [53975] (6 species)
    expressed only in the lactating mammary gland, strongly binds calcium ion
    1. 2495041Species Cow (Bos taurus) [TaxId:9913] [53980] (3 PDB entries)
    2. 2495058Species Goat (Capra hircus) [TaxId:9925] [53979] (5 PDB entries)
    3. 2495066Species Guinea pig (Cavia porcellus) [TaxId:10141] [53978] (1 PDB entry)
    4. 2495068Species Human (Homo sapiens) [TaxId:9606] [53977] (3 PDB entries)
    5. 2495072Species Mouse (Mus musculus) [TaxId:10090] [69628] (14 PDB entries)
    6. 2495101Species Yellow baboon (Papio cynocephalus) [TaxId:9556] [53976] (1 PDB entry)
  2. 2495103Lysozyme [53961] (14 species)
    ubiquitous in a variety of tissues and secretions
    1. 2495104Species Australian echidna (Tachyglossus aculeatus) [TaxId:9261] [53972] (1 PDB entry)
    2. 2495106Species Bobwhite quail (Colinus virginianus) [TaxId:9014] [53966] (3 PDB entries)
    3. 2495111Species Chicken (Gallus gallus) [TaxId:9031] [53962] (724 PDB entries)
      Uniprot P00698
    4. 2495911Species Dog (Canis familiaris), milk [TaxId:9615] [53971] (4 PDB entries)
    5. 2495918Species Guinea fowl (Numida meleagris) [TaxId:8996] [53964] (2 PDB entries)
    6. 2495922Species Horse (Equus caballus), milk [TaxId:9796] [53970] (1 PDB entry)
    7. 2495924Species Human (Homo sapiens) [TaxId:9606] [53969] (203 PDB entries)
      Uniprot P00695
    8. 2496148Species Japanese quail (Coturnix coturnix japonica) [TaxId:93934] [53967] (1 PDB entry)
    9. 2496150Species Mouse (Mus musculus) [TaxId:10090] [75329] (1 PDB entry)
    10. 2496152Species Pheasant (Phasianus colchicus) [TaxId:9054] [53965] (2 PDB entries)
    11. 2496156Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [53973] (7 PDB entries)
    12. 2496164Species Silkworm (Bombyx mori) [TaxId:7091] [64201] (1 PDB entry)
    13. 2496166Species Tasar silkworm (Antheraea mylitta) [TaxId:34739] [69627] (1 PDB entry)
      induced antibacterial protein
    14. 2496168Species Turkey (Meleagris gallopavo) [TaxId:9103] [53963] (13 PDB entries)
  3. 2496184automated matches [190299] (7 species)
    not a true protein
    1. 2496185Species Chicken (Gallus gallus) [TaxId:9031] [196365] (14 PDB entries)
    2. 2496202Species Cow (Bos taurus) [TaxId:9913] [187106] (2 PDB entries)
    3. 2496210Species Dog (Canis familiaris) [TaxId:9615] [188283] (1 PDB entry)
    4. 2496213Species Duck (Anas platyrhynchos) [TaxId:8839] [341650] (6 PDB entries)
    5. 2496219Species Human (Homo sapiens) [TaxId:9606] [188701] (6 PDB entries)
    6. 2496227Species Mus musculus [311150] (7 PDB entries)
    7. 2496242Species Pelodiscus sinensis [TaxId:13735] [187773] (1 PDB entry)

More info for Family d.2.1.2: C-type lysozyme

Timeline for Family d.2.1.2: C-type lysozyme: