Lineage for Family d.2.1.2: C-type lysozyme

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2152584Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 2152585Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 2152623Family d.2.1.2: C-type lysozyme [53960] (3 protein domains)
    automatically mapped to Pfam PF00062

Protein Domains:

  1. 2152624alpha-Lactalbumin [53975] (6 species)
    expressed only in the lactating mammary gland, strongly binds calcium ion
    1. 2152625Species Cow (Bos taurus) [TaxId:9913] [53980] (3 PDB entries)
    2. 2152642Species Goat (Capra hircus) [TaxId:9925] [53979] (5 PDB entries)
    3. 2152650Species Guinea pig (Cavia porcellus) [TaxId:10141] [53978] (1 PDB entry)
    4. 2152652Species Human (Homo sapiens) [TaxId:9606] [53977] (3 PDB entries)
    5. 2152656Species Mouse (Mus musculus) [TaxId:10090] [69628] (14 PDB entries)
    6. 2152685Species Yellow baboon (Papio cynocephalus) [TaxId:9556] [53976] (1 PDB entry)
  2. 2152687Lysozyme [53961] (14 species)
    ubiquitous in a variety of tissues and secretions
    1. 2152688Species Australian echidna (Tachyglossus aculeatus) [TaxId:9261] [53972] (1 PDB entry)
    2. 2152690Species Bobwhite quail (Colinus virginianus) [TaxId:9014] [53966] (3 PDB entries)
    3. 2152695Species Chicken (Gallus gallus) [TaxId:9031] [53962] (711 PDB entries)
      Uniprot P00698
    4. 2153392Species Dog (Canis familiaris), milk [TaxId:9615] [53971] (4 PDB entries)
    5. 2153399Species Guinea fowl (Numida meleagris) [TaxId:8996] [53964] (2 PDB entries)
    6. 2153403Species Horse (Equus caballus), milk [TaxId:9796] [53970] (1 PDB entry)
    7. 2153405Species Human (Homo sapiens) [TaxId:9606] [53969] (203 PDB entries)
      Uniprot P00695
    8. 2153626Species Japanese quail (Coturnix coturnix japonica) [TaxId:93934] [53967] (1 PDB entry)
    9. 2153628Species Mouse (Mus musculus) [TaxId:10090] [75329] (1 PDB entry)
    10. 2153630Species Pheasant (Phasianus colchicus) [TaxId:9054] [53965] (2 PDB entries)
    11. 2153634Species Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [53973] (7 PDB entries)
    12. 2153642Species Silkworm (Bombyx mori) [TaxId:7091] [64201] (1 PDB entry)
    13. 2153644Species Tasar silkworm (Antheraea mylitta) [TaxId:34739] [69627] (1 PDB entry)
      induced antibacterial protein
    14. 2153646Species Turkey (Meleagris gallopavo) [TaxId:9103] [53963] (13 PDB entries)
  3. 2153662automated matches [190299] (7 species)
    not a true protein
    1. 2153663Species Chicken (Gallus gallus) [TaxId:9031] [196365] (15 PDB entries)
    2. 2153681Species Cow (Bos taurus) [TaxId:9913] [187106] (2 PDB entries)
    3. 2153689Species Dog (Canis familiaris) [TaxId:9615] [188283] (1 PDB entry)
    4. 2153692Species Human (Homo sapiens) [TaxId:9606] [188701] (6 PDB entries)
    5. 2153700Species Mus musculus [311150] (7 PDB entries)
    6. 2153715Species Pelodiscus sinensis [TaxId:13735] [187773] (1 PDB entry)
    7. 2298349Species Anas platyrhynchos [TaxId:8839] [341650] (3 PDB entries)

More info for Family d.2.1.2: C-type lysozyme

Timeline for Family d.2.1.2: C-type lysozyme: