Lineage for Protein: Trp RNA-binding attenuation protein (TRAP)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2071633Superfamily b.82.5: TRAP-like [51219] (2 families) (S)
    shorter variant of double-helix; assembles in large ring-like structures containing from 9 to 11 domains
  5. 2071634Family b.82.5.1: Trp RNA-binding attenuation protein (TRAP) [51220] (2 protein domains)
    oligomeric ring consists of 11 single-domain subunits
    automatically mapped to Pfam PF02081
  6. 2071635Protein Trp RNA-binding attenuation protein (TRAP) [51221] (2 species)

Species:

  1. 2071636Bacillus stearothermophilus [TaxId:1422] [51223] (11 PDB entries)
    1. Domains for 1c9s:
      1. 2071668Domain d1c9sa_: 1c9s A: [28175]
        protein/RNA complex; complexed with trp
      2. 2071669Domain d1c9sb_: 1c9s B: [28176]
        protein/RNA complex; complexed with trp
      3. 2071670Domain d1c9sc_: 1c9s C: [28177]
        protein/RNA complex; complexed with trp
      4. 2071671Domain d1c9sd_: 1c9s D: [28178]
        protein/RNA complex; complexed with trp
      5. 2071672Domain d1c9se_: 1c9s E: [28179]
        protein/RNA complex; complexed with trp
      6. 2071673Domain d1c9sf_: 1c9s F: [28180]
        protein/RNA complex; complexed with trp
      7. 2071674Domain d1c9sg_: 1c9s G: [28181]
        protein/RNA complex; complexed with trp
      8. 2071675Domain d1c9sh_: 1c9s H: [28182]
        protein/RNA complex; complexed with trp
      9. 2071676Domain d1c9si_: 1c9s I: [28183]
        protein/RNA complex; complexed with trp
      10. 2071677Domain d1c9sj_: 1c9s J: [28184]
        protein/RNA complex; complexed with trp
      11. 2071678Domain d1c9sk_: 1c9s K: [28185]
        protein/RNA complex; complexed with trp
      12. 2071679Domain d1c9sl_: 1c9s L: [28186]
        protein/RNA complex; complexed with trp
      13. 2071680Domain d1c9sm_: 1c9s M: [28187]
        protein/RNA complex; complexed with trp
      14. 2071681Domain d1c9sn_: 1c9s N: [28188]
        protein/RNA complex; complexed with trp
      15. 2071682Domain d1c9so_: 1c9s O: [28189]
        protein/RNA complex; complexed with trp
      16. 2071683Domain d1c9sp_: 1c9s P: [28190]
        protein/RNA complex; complexed with trp
      17. 2071684Domain d1c9sq_: 1c9s Q: [28191]
        protein/RNA complex; complexed with trp
      18. 2071685Domain d1c9sr_: 1c9s R: [28192]
        protein/RNA complex; complexed with trp
      19. 2071686Domain d1c9ss_: 1c9s S: [28193]
        protein/RNA complex; complexed with trp
      20. 2071687Domain d1c9st_: 1c9s T: [28194]
        protein/RNA complex; complexed with trp
      21. 2071688Domain d1c9su_: 1c9s U: [28195]
        protein/RNA complex; complexed with trp
      22. 2071689Domain d1c9sv_: 1c9s V: [28196]
        protein/RNA complex; complexed with trp
    2. Domains for 1gtf:
      1. 2071637Domain d1gtfa_: 1gtf A: [70460]
        protein/RNA complex; complexed with trp
      2. 2071638Domain d1gtfb_: 1gtf B: [70461]
        protein/RNA complex; complexed with trp
      3. 2071639Domain d1gtfc_: 1gtf C: [70462]
        protein/RNA complex; complexed with trp
      4. 2071640Domain d1gtfd_: 1gtf D: [70463]
        protein/RNA complex; complexed with trp
      5. 2071641Domain d1gtfe_: 1gtf E: [70464]
        protein/RNA complex; complexed with trp
      6. 2071642Domain d1gtff_: 1gtf F: [70465]
        protein/RNA complex; complexed with trp
      7. 2071643Domain d1gtfg_: 1gtf G: [70466]
        protein/RNA complex; complexed with trp
      8. 2071644Domain d1gtfh_: 1gtf H: [70467]
        protein/RNA complex; complexed with trp
      9. 2071645Domain d1gtfi_: 1gtf I: [70468]
        protein/RNA complex; complexed with trp
      10. 2071646Domain d1gtfj_: 1gtf J: [70469]
        protein/RNA complex; complexed with trp
      11. 2071647Domain d1gtfk_: 1gtf K: [70470]
        protein/RNA complex; complexed with trp
      12. 2071648Domain d1gtfl_: 1gtf L: [70471]
        protein/RNA complex; complexed with trp
      13. 2071649Domain d1gtfm_: 1gtf M: [70472]
        protein/RNA complex; complexed with trp
      14. 2071650Domain d1gtfn_: 1gtf N: [70473]
        protein/RNA complex; complexed with trp
      15. 2071651Domain d1gtfo_: 1gtf O: [70474]
        protein/RNA complex; complexed with trp
      16. 2071652Domain d1gtfp_: 1gtf P: [70475]
        protein/RNA complex; complexed with trp
      17. 2071653Domain d1gtfq_: 1gtf Q: [70476]
        protein/RNA complex; complexed with trp
      18. 2071654Domain d1gtfr_: 1gtf R: [70477]
        protein/RNA complex; complexed with trp
      19. 2071655Domain d1gtfs_: 1gtf S: [70478]
        protein/RNA complex; complexed with trp
      20. 2071656Domain d1gtft_: 1gtf T: [70479]
        protein/RNA complex; complexed with trp
      21. 2071657Domain d1gtfu_: 1gtf U: [70480]
        protein/RNA complex; complexed with trp
      22. 2071658Domain d1gtfv_: 1gtf V: [70481]
        protein/RNA complex; complexed with trp
    3. Domains for 1gtn:
      1. 2071762Domain d1gtna_: 1gtn A: [70507]
        protein/RNA complex; complexed with trp
      2. 2071763Domain d1gtnb_: 1gtn B: [70508]
        protein/RNA complex; complexed with trp
      3. 2071764Domain d1gtnc_: 1gtn C: [70509]
        protein/RNA complex; complexed with trp
      4. 2071765Domain d1gtnd_: 1gtn D: [70510]
        protein/RNA complex; complexed with trp
      5. 2071766Domain d1gtne_: 1gtn E: [70511]
        protein/RNA complex; complexed with trp
      6. 2071767Domain d1gtnf_: 1gtn F: [70512]
        protein/RNA complex; complexed with trp
      7. 2071768Domain d1gtng_: 1gtn G: [70513]
        protein/RNA complex; complexed with trp
      8. 2071769Domain d1gtnh_: 1gtn H: [70514]
        protein/RNA complex; complexed with trp
      9. 2071770Domain d1gtni_: 1gtn I: [70515]
        protein/RNA complex; complexed with trp
      10. 2071771Domain d1gtnj_: 1gtn J: [70516]
        protein/RNA complex; complexed with trp
      11. 2071772Domain d1gtnk_: 1gtn K: [70517]
        protein/RNA complex; complexed with trp
      12. 2071773Domain d1gtnl_: 1gtn L: [70518]
        protein/RNA complex; complexed with trp
      13. 2071774Domain d1gtnm_: 1gtn M: [70519]
        protein/RNA complex; complexed with trp
      14. 2071775Domain d1gtnn_: 1gtn N: [70520]
        protein/RNA complex; complexed with trp
      15. 2071776Domain d1gtno_: 1gtn O: [70521]
        protein/RNA complex; complexed with trp
      16. 2071777Domain d1gtnp_: 1gtn P: [70522]
        protein/RNA complex; complexed with trp
      17. 2071778Domain d1gtnq_: 1gtn Q: [70523]
        protein/RNA complex; complexed with trp
      18. 2071779Domain d1gtnr_: 1gtn R: [70524]
        protein/RNA complex; complexed with trp
      19. 2071780Domain d1gtns_: 1gtn S: [70525]
        protein/RNA complex; complexed with trp
      20. 2071781Domain d1gtnt_: 1gtn T: [70526]
        protein/RNA complex; complexed with trp
      21. 2071782Domain d1gtnu_: 1gtn U: [70527]
        protein/RNA complex; complexed with trp
      22. 2071783Domain d1gtnv_: 1gtn V: [70528]
        protein/RNA complex; complexed with trp
    4. Domains for 1qaw:
      1. 2071784Domain d1qawa_: 1qaw A: [28197]
        complexed with trp
      2. 2071785Domain d1qawb_: 1qaw B: [28198]
        complexed with trp
      3. 2071786Domain d1qawc_: 1qaw C: [28199]
        complexed with trp
      4. 2071787Domain d1qawd_: 1qaw D: [28200]
        complexed with trp
      5. 2071788Domain d1qawe_: 1qaw E: [28201]
        complexed with trp
      6. 2071789Domain d1qawf_: 1qaw F: [28202]
        complexed with trp
      7. 2071790Domain d1qawg_: 1qaw G: [28203]
        complexed with trp
      8. 2071791Domain d1qawh_: 1qaw H: [28204]
        complexed with trp
      9. 2071792Domain d1qawi_: 1qaw I: [28205]
        complexed with trp
      10. 2071793Domain d1qawj_: 1qaw J: [28206]
        complexed with trp
      11. 2071794Domain d1qawk_: 1qaw K: [28207]
        complexed with trp
    5. Domains for 1utd:
      1. 2071737Domain d1utda_: 1utd A: [99918]
        complexed with trp
      2. 2071738Domain d1utdb_: 1utd B: [99919]
        complexed with trp
      3. 2071739Domain d1utdc_: 1utd C: [99920]
        complexed with trp
      4. 2071740Domain d1utdd_: 1utd D: [99921]
        complexed with trp
      5. 2071741Domain d1utde_: 1utd E: [99922]
        complexed with trp
      6. 2071742Domain d1utdf_: 1utd F: [99923]
        complexed with trp
      7. 2071743Domain d1utdg_: 1utd G: [99924]
        complexed with trp
      8. 2071744Domain d1utdh_: 1utd H: [99925]
        complexed with trp
      9. 2071745Domain d1utdi_: 1utd I: [99926]
        complexed with trp
      10. 2071746Domain d1utdj_: 1utd J: [99927]
        complexed with trp
      11. 2071747Domain d1utdk_: 1utd K: [99928]
        complexed with trp
      12. 2071748Domain d1utdl_: 1utd L: [99929]
        complexed with trp
      13. 2071749Domain d1utdm_: 1utd M: [99930]
        complexed with trp
      14. 2071750Domain d1utdn_: 1utd N: [99931]
        complexed with trp
      15. 2071751Domain d1utdo_: 1utd O: [99932]
        complexed with trp
      16. 2071752Domain d1utdp_: 1utd P: [99933]
        complexed with trp
      17. 2071753Domain d1utdq_: 1utd Q: [99934]
        complexed with trp
      18. 2071754Domain d1utdr_: 1utd R: [99935]
        complexed with trp
      19. 2071755Domain d1utds_: 1utd S: [99936]
        complexed with trp
      20. 2071756Domain d1utdt_: 1utd T: [99937]
        complexed with trp
      21. 2071757Domain d1utdu_: 1utd U: [99938]
        complexed with trp
      22. 2071758Domain d1utdv_: 1utd V: [99939]
        complexed with trp
    6. Domains for 1utf:
      1. 2071715Domain d1utfa_: 1utf A: [99940]
        complexed with trp
        complexed with trp
      2. 2071716Domain d1utfb_: 1utf B: [99941]
        complexed with trp
        complexed with trp
      3. 2071717Domain d1utfc_: 1utf C: [99942]
        complexed with trp
        complexed with trp
      4. 2071718Domain d1utfd_: 1utf D: [99943]
        complexed with trp
        complexed with trp
      5. 2071719Domain d1utfe_: 1utf E: [99944]
        complexed with trp
        complexed with trp
      6. 2071720Domain d1utff_: 1utf F: [99945]
        complexed with trp
        complexed with trp
      7. 2071721Domain d1utfg_: 1utf G: [99946]
        complexed with trp
        complexed with trp
      8. 2071722Domain d1utfh_: 1utf H: [99947]
        complexed with trp
        complexed with trp
      9. 2071723Domain d1utfi_: 1utf I: [99948]
        complexed with trp
        complexed with trp
      10. 2071724Domain d1utfj_: 1utf J: [99949]
        complexed with trp
        complexed with trp
      11. 2071725Domain d1utfk_: 1utf K: [99950]
        complexed with trp
        complexed with trp
      12. 2071726Domain d1utfl_: 1utf L: [99951]
        complexed with trp
        complexed with trp
      13. 2071727Domain d1utfm_: 1utf M: [99952]
        complexed with trp
        complexed with trp
      14. 2071728Domain d1utfn_: 1utf N: [99953]
        complexed with trp
        complexed with trp
      15. 2071729Domain d1utfo_: 1utf O: [99954]
        complexed with trp
        complexed with trp
      16. 2071730Domain d1utfp_: 1utf P: [99955]
        complexed with trp
        complexed with trp
      17. 2071731Domain d1utfq_: 1utf Q: [99956]
        complexed with trp
        complexed with trp
      18. 2071732Domain d1utfr_: 1utf R: [99957]
        complexed with trp
        complexed with trp
      19. 2071733Domain d1utfs_: 1utf S: [99958]
        complexed with trp
        complexed with trp
      20. 2071734Domain d1utft_: 1utf T: [99959]
        complexed with trp
        complexed with trp
      21. 2071735Domain d1utfu_: 1utf U: [99960]
        complexed with trp
        complexed with trp
      22. 2071736Domain d1utfv_: 1utf V: [99961]
        complexed with trp
        complexed with trp
    7. Domains for 1utv:
      1. 2071693Domain d1utva_: 1utv A: [99971]
        complexed with trp
        complexed with trp
      2. 2071694Domain d1utvb_: 1utv B: [99972]
        complexed with trp
        complexed with trp
      3. 2071695Domain d1utvc_: 1utv C: [99973]
        complexed with trp
        complexed with trp
      4. 2071696Domain d1utvd_: 1utv D: [99974]
        complexed with trp
        complexed with trp
      5. 2071697Domain d1utve_: 1utv E: [99975]
        complexed with trp
        complexed with trp
      6. 2071698Domain d1utvf_: 1utv F: [99976]
        complexed with trp
        complexed with trp
      7. 2071699Domain d1utvg_: 1utv G: [99977]
        complexed with trp
        complexed with trp
      8. 2071700Domain d1utvh_: 1utv H: [99978]
        complexed with trp
        complexed with trp
      9. 2071701Domain d1utvi_: 1utv I: [99979]
        complexed with trp
        complexed with trp
      10. 2071702Domain d1utvj_: 1utv J: [99980]
        complexed with trp
        complexed with trp
      11. 2071703Domain d1utvk_: 1utv K: [99981]
        complexed with trp
        complexed with trp
      12. 2071704Domain d1utvl_: 1utv L: [99982]
        complexed with trp
        complexed with trp
      13. 2071705Domain d1utvm_: 1utv M: [99983]
        complexed with trp
        complexed with trp
      14. 2071706Domain d1utvn_: 1utv N: [99984]
        complexed with trp
        complexed with trp
      15. 2071707Domain d1utvo_: 1utv O: [99985]
        complexed with trp
        complexed with trp
      16. 2071708Domain d1utvp_: 1utv P: [99986]
        complexed with trp
        complexed with trp
      17. 2071709Domain d1utvq_: 1utv Q: [99987]
        complexed with trp
        complexed with trp
      18. 2071710Domain d1utvr_: 1utv R: [99988]
        complexed with trp
        complexed with trp
      19. 2071711Domain d1utvs_: 1utv S: [99989]
        complexed with trp
        complexed with trp
      20. 2071712Domain d1utvt_: 1utv T: [99990]
        complexed with trp
        complexed with trp
      21. 2071713Domain d1utvu_: 1utv U: [99991]
        complexed with trp
        complexed with trp
      22. 2071714Domain d1utvv_: 1utv V: [99992]
        complexed with trp
        complexed with trp
    8. Domains for 2exs:
      1. 2071690Domain d2exsa_: 2exs A: [164207]
        automated match to d1c9sm_
        complexed with trp
      2. 2071691Domain d2exsb_: 2exs B: [164208]
        automated match to d1c9sm_
        complexed with trp
      3. 2071692Domain d2exsc_: 2exs C: [164209]
        automated match to d1c9sm_
        complexed with trp
    9. Domains for 2ext:
      1. 2071659Domain d2exta_: 2ext A: [132563]
        automated match to d1c9sm_
        complexed with trp
      2. 2071660Domain d2extb_: 2ext B: [132564]
        automated match to d1c9sm_
        complexed with trp
      3. 2071661Domain d2extc_: 2ext C: [132565]
        automated match to d1c9sm_
        complexed with trp
    10. Domains for 2zcz:
      1. 2071662Domain d2zcza_: 2zcz A: [154379]
        automated match to d1c9sm_
        complexed with trp; mutant
      2. 2071663Domain d2zczb_: 2zcz B: [154380]
        automated match to d1c9sm_
        complexed with trp; mutant
      3. 2071664Domain d2zczc_: 2zcz C: [154381]
        automated match to d1c9sm_
        complexed with trp; mutant
      4. 2071665Domain d2zczd_: 2zcz D: [154382]
        automated match to d1c9sm_
        complexed with trp; mutant
      5. 2071666Domain d2zcze_: 2zcz E: [154383]
        automated match to d1c9sm_
        complexed with trp; mutant
      6. 2071667Domain d2zczf_: 2zcz F: [154384]
        automated match to d1c9sm_
        complexed with trp; mutant
    11. Domains for 2zd0:
      1. 2071759Domain d2zd0a_: 2zd0 A: [154385]
        automated match to d1c9sm_
        complexed with trp; mutant
      2. 2071760Domain d2zd0b_: 2zd0 B: [154386]
        automated match to d1c9sm_
        complexed with trp; mutant
      3. 2071761Domain d2zd0c_: 2zd0 C: [154387]
        automated match to d1c9sm_
        complexed with trp; mutant
  2. 2071795Bacillus subtilis [TaxId:1423] [51222] (1 PDB entry)

More info for Protein Trp RNA-binding attenuation protein (TRAP) from b.82.5.1: Trp RNA-binding attenuation protein (TRAP)

Timeline for Protein Trp RNA-binding attenuation protein (TRAP) from b.82.5.1: Trp RNA-binding attenuation protein (TRAP):