PDB entry 1gtn

View 1gtn on RCSB PDB site
Description: structure of the trp RNA-binding attenuation protein (trap) bound to an RNA molecule containing 11 gagcc repeats
Class: RNA binding protein/RNA
Keywords: RNA binding protein-RNA complex, transcription attenuation, RNA-binding protein, trp RNA
Deposited on 2002-01-16, released 2002-04-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.236
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtna_
  • Chain 'B':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnb_
  • Chain 'C':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnc_
  • Chain 'D':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnd_
  • Chain 'E':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtne_
  • Chain 'F':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnf_
  • Chain 'G':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtng_
  • Chain 'H':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnh_
  • Chain 'I':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtni_
  • Chain 'J':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnj_
  • Chain 'K':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnk_
  • Chain 'L':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnl_
  • Chain 'M':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnm_
  • Chain 'N':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnn_
  • Chain 'O':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtno_
  • Chain 'P':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnp_
  • Chain 'Q':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnq_
  • Chain 'R':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnr_
  • Chain 'S':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtns_
  • Chain 'T':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnt_
  • Chain 'U':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnu_
  • Chain 'V':
    Compound: trp RNA-binding attenuation protein
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gtnv_
  • Chain 'W':
    Compound: (gagcc)11g 56-nucleotide RNA
  • Heterogens: TRP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1gtnA (A:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnA (A:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgvieseg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1gtnB (B:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnB (B:)
nsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqt
rhgvieseg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1gtnC (C:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnC (C:)
nsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqt
rhgvieseg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1gtnD (D:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnD (D:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgviesegk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1gtnE (E:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnE (E:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgvieseg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1gtnF (F:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnF (F:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgviesegk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1gtnG (G:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnG (G:)
nsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqt
rhgviesegk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1gtnH (H:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnH (H:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgviesegk

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1gtnI (I:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnI (I:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgviesegk

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1gtnJ (J:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnJ (J:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgvieseg

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1gtnK (K:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnK (K:)
sdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiqtr
hgviesegk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1gtnL (L:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnL (L:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >1gtnM (M:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnM (M:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgviesegk

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >1gtnN (N:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnN (N:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1gtnO (O:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnO (O:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgviesegk

  • Chain 'P':
    Sequence, based on SEQRES records: (download) 
    >1gtnP (P:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnP (P:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'Q':
    Sequence, based on SEQRES records: (download) 
    >1gtnQ (Q:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnQ (Q:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >1gtnR (R:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnR (R:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >1gtnS (S:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnS (S:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'T':
    Sequence, based on SEQRES records: (download) 
    >1gtnT (T:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnT (T:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'U':
    Sequence, based on SEQRES records: (download) 
    >1gtnU (U:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnU (U:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'V':
    Sequence, based on SEQRES records: (download) 
    >1gtnV (V:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1gtnV (V:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'W':
    No sequence available.