Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 955287Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 955288Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 956278Family b.50.1.2: Pepsin-like [50646] (11 proteins)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. 956335Protein beta-secretase (memapsin) [50671] (1 species)
  7. 956336Species Human (Homo sapiens) [TaxId:9606] [50672] (117 PDB entries)
    Uniprot P56817 58-446 ! Uniprot P56817 60-447

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1fkn:
    1. 956372Domain d1fkna_: 1fkn A: [26879]
    2. 956373Domain d1fknb_: 1fkn B: [26880]
  2. Domain(s) for 1m4h:
    1. 956435Domain d1m4ha_: 1m4h A: [74455]
    2. 956436Domain d1m4hb_: 1m4h B: [74456]
  3. Domain(s) for 1sgz:
    1. 956404Domain d1sgza_: 1sgz A: [98872]
    2. 956405Domain d1sgzb_: 1sgz B: [98873]
    3. 956406Domain d1sgzc_: 1sgz C: [98874]
    4. 956407Domain d1sgzd_: 1sgz D: [98875]
  4. Domain(s) for 1tqf:
  5. Domain(s) for 1w50:
  6. Domain(s) for 1w51:
  7. Domain(s) for 1xn2:
    1. 956385Domain d1xn2a_: 1xn2 A: [122178]
      automated match to d1fkna_
    2. 956386Domain d1xn2b_: 1xn2 B: [122179]
      automated match to d1fkna_
    3. 956387Domain d1xn2c_: 1xn2 C: [122180]
      automated match to d1fkna_
    4. 956388Domain d1xn2d_: 1xn2 D: [122181]
      automated match to d1fkna_
  8. Domain(s) for 1xn3:
    1. 956408Domain d1xn3a_: 1xn3 A: [122182]
      automated match to d1fkna_
    2. 956409Domain d1xn3b_: 1xn3 B: [122183]
      automated match to d1fkna_
    3. 956410Domain d1xn3c_: 1xn3 C: [122184]
      automated match to d1fkna_
    4. 956411Domain d1xn3d_: 1xn3 D: [122185]
      automated match to d1fkna_
  9. Domain(s) for 1xs7:
  10. Domain(s) for 2b8l:
  11. Domain(s) for 2b8v:
  12. Domain(s) for 2f3e:
    1. 956429Domain d2f3ea_: 2f3e A: [132864]
      automated match to d1fkna_
      complexed with axq
    2. 956430Domain d2f3eb_: 2f3e B: [132865]
      automated match to d1fkna_
      complexed with axq
    3. 956431Domain d2f3ec_: 2f3e C: [132866]
      automated match to d1fkna_
      complexed with axq
  13. Domain(s) for 2f3f:
    1. 956454Domain d2f3fa_: 2f3f A: [132867]
      automated match to d1fkna_
      complexed with axf
    2. 956455Domain d2f3fb_: 2f3f B: [132868]
      automated match to d1fkna_
      complexed with axf
    3. 956456Domain d2f3fc_: 2f3f C: [132869]
      automated match to d1fkna_
      complexed with axf
  14. Domain(s) for 2fdp:
    1. 956521Domain d2fdpa_: 2fdp A: [133316]
      automated match to d1fkna_
      complexed with frp
    2. 956522Domain d2fdpb_: 2fdp B: [133317]
      automated match to d1fkna_
      complexed with frp
    3. 956523Domain d2fdpc_: 2fdp C: [133318]
      automated match to d1fkna_
      complexed with frp
  15. Domain(s) for 2g94:
    1. 956381Domain d2g94a_: 2g94 A: [134790]
      automated match to d1fkna_
      complexed with zpq
    2. 956382Domain d2g94b_: 2g94 B: [134791]
      automated match to d1fkna_
      complexed with zpq
    3. 956383Domain d2g94c_: 2g94 C: [134792]
      automated match to d1fkna_
      complexed with zpq
    4. 956384Domain d2g94d_: 2g94 D: [134793]
      automated match to d1fkna_
      complexed with zpq
  16. Domain(s) for 2hiz:
    1. 956509Domain d2hiza1: 2hiz A:61P-385 [136533]
      automatically matched to d1fkna_
      complexed with lij, po4
    2. 956510Domain d2hizb1: 2hiz B:61P-385 [136534]
      automatically matched to d1fkna_
      complexed with lij, po4
    3. 956511Domain d2hizc1: 2hiz C:61P-385 [136535]
      automatically matched to d1fkna_
      complexed with lij, po4
  17. Domain(s) for 2hm1:
  18. Domain(s) for 2iqg:
  19. Domain(s) for 2irz:
  20. Domain(s) for 2is0:
  21. Domain(s) for 2ntr:
  22. Domain(s) for 2oah:
  23. Domain(s) for 2of0:
  24. Domain(s) for 2ohk:
  25. Domain(s) for 2ohl:
  26. Domain(s) for 2ohm:
  27. Domain(s) for 2ohn:
  28. Domain(s) for 2ohp:
  29. Domain(s) for 2ohq:
  30. Domain(s) for 2ohr:
  31. Domain(s) for 2ohs:
  32. Domain(s) for 2oht:
  33. Domain(s) for 2ohu:
  34. Domain(s) for 2p4j:
    1. 956501Domain d2p4ja_: 2p4j A: [149210]
      automated match to d1fkna_
      complexed with 23i
    2. 956502Domain d2p4jb_: 2p4j B: [149211]
      automated match to d1fkna_
      complexed with 23i
    3. 956503Domain d2p4jc_: 2p4j C: [149212]
      automated match to d1fkna_
      complexed with 23i
    4. 956504Domain d2p4jd_: 2p4j D: [149213]
      automated match to d1fkna_
      complexed with 23i
  35. Domain(s) for 2p83:
    1. 956506Domain d2p83a1: 2p83 A:61P-385 [139519]
      automatically matched to d1fkna_
      complexed with mr0, po4
    2. 956507Domain d2p83b1: 2p83 B:61P-385 [139520]
      automatically matched to d1fkna_
      complexed with mr0, po4
    3. 956508Domain d2p83c1: 2p83 C:61P-385 [139521]
      automatically matched to d1fkna_
      complexed with mr0, po4
  36. Domain(s) for 2p8h:
  37. Domain(s) for 2ph6:
  38. Domain(s) for 2ph8:
  39. Domain(s) for 2q11:
    1. 956540Domain d2q11a_: 2q11 A: [167385]
      automated match to d1fkna_
      complexed with xx4
    2. 956541Domain d2q11b_: 2q11 B: [167386]
      automated match to d1fkna_
      complexed with xx4
    3. 956542Domain d2q11c_: 2q11 C: [167387]
      automated match to d1fkna_
      complexed with xx4
  40. Domain(s) for 2q15:
  41. Domain(s) for 2qk5:
    1. 956427Domain d2qk5a_: 2qk5 A: [150837]
      automated match to d1fkna_
      complexed with cs5
    2. 956428Domain d2qk5b_: 2qk5 B: [150838]
      automated match to d1fkna_
      complexed with cs5
  42. Domain(s) for 2qmd:
    1. 956341Domain d2qmda_: 2qmd A: [150878]
      automated match to d1fkna_
      complexed with cs7, tar
    2. 956342Domain d2qmdb_: 2qmd B: [150879]
      automated match to d1fkna_
      complexed with cs7, tar
  43. Domain(s) for 2qmf:
    1. 956368Domain d2qmfa_: 2qmf A: [150880]
      automated match to d1fkna_
      complexed with cs9, tar
    2. 956369Domain d2qmfb_: 2qmf B: [150881]
      automated match to d1fkna_
      complexed with cs9, tar
  44. Domain(s) for 2qmg:
    1. 956374Domain d2qmga_: 2qmg A: [150882]
      automated match to d1fkna_
      complexed with sc6, tar
    2. 956375Domain d2qmgb_: 2qmg B: [150883]
      automated match to d1fkna_
      complexed with sc6, tar
  45. Domain(s) for 2qp8:
    1. 956337Domain d2qp8a_: 2qp8 A: [151197]
      automated match to d1fkna_
      complexed with sc7, tar
    2. 956338Domain d2qp8b_: 2qp8 B: [151198]
      automated match to d1fkna_
      complexed with sc7, tar
  46. Domain(s) for 2qu2:
  47. Domain(s) for 2qu3:
  48. Domain(s) for 2qzk:
  49. Domain(s) for 2va5:
  50. Domain(s) for 2va6:
  51. Domain(s) for 2va7:
  52. Domain(s) for 2vkm:
    1. 956418Domain d2vkma_: 2vkm A: [168665]
      automated match to d1fkna_
      complexed with bsd
    2. 956419Domain d2vkmb_: 2vkm B: [168666]
      automated match to d1fkna_
      complexed with bsd
    3. 956420Domain d2vkmc_: 2vkm C: [168667]
      automated match to d1fkna_
      complexed with bsd
    4. 956421Domain d2vkmd_: 2vkm D: [168668]
      automated match to d1fkna_
      complexed with bsd
  53. Domain(s) for 2zdz:
  54. Domain(s) for 2ze1:
  55. Domain(s) for 2zhr:
    1. 956477Domain d2zhra_: 2zhr A: [154468]
      automated match to d1fkna_
    2. 956478Domain d2zhrb_: 2zhr B: [154469]
      automated match to d1fkna_
  56. Domain(s) for 2zhs:
  57. Domain(s) for 2zht:
  58. Domain(s) for 2zhu:
  59. Domain(s) for 2zhv:
  60. Domain(s) for 2zjh:
  61. Domain(s) for 2zji:
  62. Domain(s) for 2zjj:
  63. Domain(s) for 2zjl:
  64. Domain(s) for 2zjm:
  65. Domain(s) for 2zjn:
  66. Domain(s) for 3cib:
    1. 956346Domain d3ciba_: 3cib A: [156664]
      automated match to d1fkna_
      complexed with 314, tar
    2. 956347Domain d3cibb_: 3cib B: [156665]
      automated match to d1fkna_
      complexed with 314, tar
  67. Domain(s) for 3cic:
    1. 956350Domain d3cica_: 3cic A: [156666]
      automated match to d1fkna_
      complexed with 316, tar
    2. 956351Domain d3cicb_: 3cic B: [156667]
      automated match to d1fkna_
      complexed with 316, tar
  68. Domain(s) for 3cid:
    1. 956359Domain d3cida_: 3cid A: [156668]
      automated match to d1fkna_
      complexed with 318, tar
    2. 956360Domain d3cidb_: 3cid B: [156669]
      automated match to d1fkna_
      complexed with 318, tar
  69. Domain(s) for 3duy:
    1. 956400Domain d3duya_: 3duy A: [174252]
      automated match to d1fkna_
      complexed with afj
    2. 956401Domain d3duyb_: 3duy B: [174253]
      automated match to d1fkna_
      complexed with afj
    3. 956402Domain d3duyc_: 3duy C: [174254]
      automated match to d1fkna_
      complexed with afj
  70. Domain(s) for 3dv1:
    1. 956445Domain d3dv1a_: 3dv1 A: [174259]
      automated match to d1fkna_
      complexed with ar9
    2. 956446Domain d3dv1b_: 3dv1 B: [174260]
      automated match to d1fkna_
      complexed with ar9
    3. 956447Domain d3dv1c_: 3dv1 C: [174261]
      automated match to d1fkna_
      complexed with ar9
  71. Domain(s) for 3dv5:
    1. 956432Domain d3dv5a_: 3dv5 A: [174267]
      automated match to d1fkna_
      complexed with bav
    2. 956433Domain d3dv5b_: 3dv5 B: [174268]
      automated match to d1fkna_
      complexed with bav
    3. 956434Domain d3dv5c_: 3dv5 C: [174269]
      automated match to d1fkna_
      complexed with bav
  72. Domain(s) for 3exo:
  73. Domain(s) for 3fkt:
  74. Domain(s) for 3hvg:
    1. 956489Domain d3hvga_: 3hvg A: [177866]
      automated match to d1fkna_
      complexed with ev0, gol
    2. 956490Domain d3hvgb_: 3hvg B: [177867]
      automated match to d1fkna_
      complexed with ev0, gol
    3. 956491Domain d3hvgc_: 3hvg C: [177868]
      automated match to d1fkna_
      complexed with ev0, gol
  75. Domain(s) for 3hw1:
    1. 956512Domain d3hw1a_: 3hw1 A: [177884]
      automated match to d1fkna_
      complexed with ev2, gol
    2. 956513Domain d3hw1b_: 3hw1 B: [177885]
      automated match to d1fkna_
      complexed with ev2, gol
    3. 956514Domain d3hw1c_: 3hw1 C: [177886]
      automated match to d1fkna_
      complexed with ev2, gol
  76. Domain(s) for 3i25:
    1. 956442Domain d3i25a_: 3i25 A: [178023]
      automated match to d1fkna_
      complexed with mv7
    2. 956443Domain d3i25b_: 3i25 B: [178024]
      automated match to d1fkna_
      complexed with mv7
    3. 956444Domain d3i25c_: 3i25 C: [178025]
      automated match to d1fkna_
      complexed with mv7
  77. Domain(s) for 3igb:
  78. Domain(s) for 3in3:
  79. Domain(s) for 3in4:
  80. Domain(s) for 3ind:
  81. Domain(s) for 3ine:
  82. Domain(s) for 3inf:
  83. Domain(s) for 3inh:
  84. Domain(s) for 3ivh:
  85. Domain(s) for 3ivi:
    1. 956461Domain d3ivia_: 3ivi A: [178630]
      automated match to d1fkna_
      complexed with 2li, gol, so4
    2. 956462Domain d3ivib_: 3ivi B: [178631]
      automated match to d1fkna_
      complexed with 2li, gol, so4
    3. 956463Domain d3ivic_: 3ivi C: [178632]
      automated match to d1fkna_
      complexed with 2li, gol, so4
  86. Domain(s) for 3ixj:
    1. 956458Domain d3ixja_: 3ixj A: [178673]
      automated match to d1fkna_
      protein/RNA complex; complexed with 586, so4
    2. 956459Domain d3ixjb_: 3ixj B: [178674]
      automated match to d1fkna_
      protein/RNA complex; complexed with 586, so4
    3. 956460Domain d3ixjc_: 3ixj C: [178675]
      automated match to d1fkna_
      protein/RNA complex; complexed with 586, so4
  87. Domain(s) for 3ixk:
    1. 956525Domain d3ixka_: 3ixk A: [178676]
      automated match to d1fkna_
      complexed with 929
    2. 956526Domain d3ixkb_: 3ixk B: [178677]
      automated match to d1fkna_
      complexed with 929
    3. 956527Domain d3ixkc_: 3ixk C: [178678]
      automated match to d1fkna_
      complexed with 929
  88. Domain(s) for 3k5c:
    1. 956423Domain d3k5ca_: 3k5c A: [179090]
      automated match to d1fkna_
      complexed with 0bi
    2. 956424Domain d3k5cb_: 3k5c B: [179091]
      automated match to d1fkna_
      complexed with 0bi
    3. 956425Domain d3k5cc_: 3k5c C: [179092]
      automated match to d1fkna_
      complexed with 0bi
  89. Domain(s) for 3k5d:
    1. 956528Domain d3k5da_: 3k5d A: [179093]
      automated match to d1fkna_
      complexed with xli
    2. 956529Domain d3k5db_: 3k5d B: [179094]
      automated match to d1fkna_
      complexed with xli
    3. 956530Domain d3k5dc_: 3k5d C: [179095]
      automated match to d1fkna_
      complexed with xli
  90. Domain(s) for 3k5f:
    1. 956466Domain d3k5fa_: 3k5f A: [179098]
      automated match to d1fkna_
      complexed with ayh
    2. 956467Domain d3k5fb_: 3k5f B: [179099]
      automated match to d1fkna_
      complexed with ayh
    3. 956468Domain d3k5fc_: 3k5f C: [179100]
      automated match to d1fkna_
      complexed with ayh
  91. Domain(s) for 3k5g:
    1. 956412Domain d3k5ga_: 3k5g A: [179101]
      automated match to d1fkna_
      complexed with bjc
    2. 956413Domain d3k5gb_: 3k5g B: [179102]
      automated match to d1fkna_
      complexed with bjc
    3. 956414Domain d3k5gc_: 3k5g C: [179103]
      automated match to d1fkna_
      complexed with bjc
  92. Domain(s) for 3kmx:
    1. 956348Domain d3kmxa_: 3kmx A: [179461]
      automated match to d1fkna_
      complexed with g00
    2. 956349Domain d3kmxb_: 3kmx B: [179462]
      automated match to d1fkna_
      complexed with g00
  93. Domain(s) for 3kmy:
    1. 956391Domain d3kmya_: 3kmy A: [179463]
      automated match to d1fkna_
      complexed with d8y
    2. 956392Domain d3kmyb_: 3kmy B: [179464]
      automated match to d1fkna_
      complexed with d8y
  94. Domain(s) for 3kn0:
    1. 956378Domain d3kn0a_: 3kn0 A: [179465]
      automated match to d1fkna_
      complexed with 3to, tla
    2. 956379Domain d3kn0b_: 3kn0 B: [179466]
      automated match to d1fkna_
      complexed with 3to, tla
  95. Domain(s) for 3kyr:
    1. 956518Domain d3kyra_: 3kyr A: [179811]
      automated match to d1fkna_
      complexed with 038
    2. 956519Domain d3kyrb_: 3kyr B: [179812]
      automated match to d1fkna_
      complexed with 038
    3. 956520Domain d3kyrc_: 3kyr C: [179813]
      automated match to d1fkna_
      complexed with 038
  96. Domain(s) for 3l38:
  97. Domain(s) for 3l3a:
  98. Domain(s) for 3l58:
    1. 956364Domain d3l58a_: 3l58 A: [179951]
      automated match to d1fkna_
      complexed with cs5
    2. 956365Domain d3l58b_: 3l58 B: [179952]
      automated match to d1fkna_
      complexed with cs5
  99. Domain(s) for 3l59:
    1. 956415Domain d3l59a_: 3l59 A: [179953]
      automated match to d1fkna_
      complexed with bdj, tar
    2. 956416Domain d3l59b_: 3l59 B: [179954]
      automated match to d1fkna_
      complexed with bdj, tar
  100. Domain(s) for 3l5b:
    1. 956361Domain d3l5ba_: 3l5b A: [179955]
      automated match to d1fkna_
      complexed with bdo, tar
    2. 956362Domain d3l5bb_: 3l5b B: [179956]
      automated match to d1fkna_
      complexed with bdo, tar
  101. Domain(s) for 3l5c:
    1. 956366Domain d3l5ca_: 3l5c A: [179957]
      automated match to d1fkna_
      complexed with bdq, tar
    2. 956367Domain d3l5cb_: 3l5c B: [179958]
      automated match to d1fkna_
      complexed with bdq, tar
  102. Domain(s) for 3l5d:
    1. 956352Domain d3l5da_: 3l5d A: [179959]
      automated match to d1fkna_
      complexed with bdv, tar
    2. 956353Domain d3l5db_: 3l5d B: [179960]
      automated match to d1fkna_
      complexed with bdv, tar
  103. Domain(s) for 3l5e:
    1. 956339Domain d3l5ea_: 3l5e A: [179961]
      automated match to d1fkna_
      complexed with bdw, tar
    2. 956340Domain d3l5eb_: 3l5e B: [179962]
      automated match to d1fkna_
      complexed with bdw, tar
  104. Domain(s) for 3l5f:
    1. 956343Domain d3l5fa_: 3l5f A: [179963]
      automated match to d1fkna_
      complexed with bdx, tar
    2. 956344Domain d3l5fb_: 3l5f B: [179964]
      automated match to d1fkna_
      complexed with bdx, tar
  105. Domain(s) for 3lhg:
  106. Domain(s) for 3lnk:
    1. 956357Domain d3lnka_: 3lnk A: [180411]
      automated match to d1fkna_
      complexed with 74a, tla
    2. 956358Domain d3lnkb_: 3lnk B: [180412]
      automated match to d1fkna_
      complexed with 74a, tla
  107. Domain(s) for 3msj:
    1. 956354Domain d3msja_: 3msj A: [181530]
      automated match to d1fkna_
      complexed with ev3, gol
    2. 956355Domain d3msjb_: 3msj B: [181531]
      automated match to d1fkna_
      complexed with ev3, gol
    3. 956356Domain d3msjc_: 3msj C: [181532]
      automated match to d1fkna_
      complexed with ev3, gol
  108. Domain(s) for 3msk:
  109. Domain(s) for 3msl:
  110. Domain(s) for 3n4l:
    1. 956536Domain d3n4la_: 3n4l A: [181896]
      automated match to d1fkna_
      complexed with 842
    2. 956537Domain d3n4lb_: 3n4l B: [181897]
      automated match to d1fkna_
      complexed with 842
    3. 956538Domain d3n4lc_: 3n4l C: [181898]
      automated match to d1fkna_
      complexed with 842
  111. Domain(s) for 3nsh:
    1. 956493Domain d3nsha_: 3nsh A: [182507]
      automated match to d1fkna_
      complexed with 957
    2. 956494Domain d3nshb_: 3nsh B: [182508]
      automated match to d1fkna_
      complexed with 957
    3. 956495Domain d3nshc_: 3nsh C: [182509]
      automated match to d1fkna_
      complexed with 957
  112. Domain(s) for 3pi5:
    1. 956486Domain d3pi5a_: 3pi5 A: [183756]
      automated match to d1fkna_
      complexed with 3p5
    2. 956487Domain d3pi5b_: 3pi5 B: [183757]
      automated match to d1fkna_
      complexed with 3p5
    3. 956488Domain d3pi5c_: 3pi5 C: [183758]
      automated match to d1fkna_
      complexed with 3p5
  113. Domain(s) for 3qbh:
    1. 956451Domain d3qbha_: 3qbh A: [184319]
      automated match to d1fkna_
      complexed with qbh
    2. 956452Domain d3qbhb_: 3qbh B: [184320]
      automated match to d1fkna_
      complexed with qbh
    3. 956453Domain d3qbhc_: 3qbh C: [184321]
      automated match to d1fkna_
      complexed with qbh
  114. Domain(s) for 3r1g:
  115. Domain(s) for 3s2o:
  116. Domain(s) for 3u6a:
    1. 956448Domain d3u6aa_: 3u6a A: [186093]
      automated match to d1fkna_
      complexed with 18p, so4
    2. 956449Domain d3u6ab_: 3u6a B: [186094]
      automated match to d1fkna_
      complexed with 18p, so4
    3. 956450Domain d3u6ac_: 3u6a C: [186095]
      automated match to d1fkna_
      complexed with 18p, so4
  117. Domain(s) for 3ufl:

More info for Species Human (Homo sapiens) [TaxId:9606] from b.50.1.2 beta-secretase (memapsin)

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.50.1.2 beta-secretase (memapsin):