Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2409885Superfamily b.121.1: PHM/PNGase F [49742] (2 families) (S)
    members of this superfamily bind peptide substrates
    duplication: consists of two domains of this fold packed together like the adjacent nucleoplasmin subunits
  5. 2409899Family b.121.1.2: Peptidylglycine alpha-hydroxylating monooxygenase, PHM [49746] (1 protein)
  6. 2409900Protein Peptidylglycine alpha-hydroxylating monooxygenase, PHM [63402] (1 species)
  7. 2409901Species Norway rat (Rattus norvegicus) [TaxId:10116] [49748] (25 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1opm:
    1. 2409914Domain d1opma1: 1opm A:45-198 [59013]
      complexed with azi, cu, gol, iyg, ni
    2. 2409915Domain d1opma2: 1opm A:199-354 [59014]
      complexed with azi, cu, gol, iyg, ni
  2. Domain(s) for 1phm:
    1. 2409906Domain d1phma1: 1phm A:45-198 [59015]
      complexed with azi, cu, gol
    2. 2409907Domain d1phma2: 1phm A:199-354 [59016]
      complexed with azi, cu, gol
  3. Domain(s) for 1sdw:
    1. 2409904Domain d1sdwa1: 1sdw A:45-198 [98810]
      complexed with cu, gol, iyt, ni, oxy
    2. 2409905Domain d1sdwa2: 1sdw A:199-356 [98811]
      complexed with cu, gol, iyt, ni, oxy
  4. Domain(s) for 1yi9:
    1. 2409902Domain d1yi9a1: 1yi9 A:47-198 [123276]
      automated match to d1yi9a1
      complexed with cu, gol; mutant
    2. 2409903Domain d1yi9a2: 1yi9 A:199-355 [123277]
      automated match to d1yi9a2
      complexed with cu, gol; mutant
  5. Domain(s) for 1yip:
    1. 2409918Domain d1yipa1: 1yip A:45-198 [123328]
      automated match to d1sdwa1
      complexed with cu
    2. 2409919Domain d1yipa2: 1yip A:199-355 [123329]
      automated match to d1phma2
      complexed with cu
  6. Domain(s) for 1yjk:
    1. 2409908Domain d1yjka1: 1yjk A:50-198 [123423]
      automated match to d3miha1
      complexed with cu, gol
    2. 2409909Domain d1yjka2: 1yjk A:199-355 [123424]
      complexed with cu, gol
  7. Domain(s) for 1yjl:
    1. 2409924Domain d1yjla1: 1yjl A:50-198 [123425]
      automated match to d3miha1
    2. 2409925Domain d1yjla2: 1yjl A:199-355 [123426]
      automated match to d1yjla2
  8. Domain(s) for 3mib:
    1. 2409920Domain d3miba1: 3mib A:45-198 [213265]
      automated match to d1sdwa1
      complexed with cu, gol, ni, no2
    2. 2409921Domain d3miba2: 3mib A:199-354 [213266]
      automated match to d1sdwa2
      complexed with cu, gol, ni, no2
  9. Domain(s) for 3mic:
    1. 2409922Domain d3mica1: 3mic A:46-198 [213267]
      automated match to d1sdwa1
      complexed with azi, cu, gol, na, ni
    2. 2409923Domain d3mica2: 3mic A:199-354 [213268]
      automated match to d1sdwa2
      complexed with azi, cu, gol, na, ni
  10. Domain(s) for 3mid:
    1. 2409930Domain d3mida1: 3mid A:45-198 [247712]
      automated match to d1sdwa1
      complexed with azi, cu, gol, ni
    2. 2409931Domain d3mida2: 3mid A:199-355 [247713]
      automated match to d1phma2
      complexed with azi, cu, gol, ni
  11. Domain(s) for 3mif:
    1. 2409910Domain d3mifa1: 3mif A:45-198 [213269]
      automated match to d1sdwa1
      complexed with cmo, cu, gol, ni
    2. 2409911Domain d3mifa2: 3mif A:199-354 [213270]
      automated match to d1sdwa2
      complexed with cmo, cu, gol, ni
  12. Domain(s) for 3mig:
    1. 2409928Domain d3miga1: 3mig A:46-198 [213271]
      automated match to d1sdwa1
      complexed with cu, gol, ni, no2
    2. 2409929Domain d3miga2: 3mig A:199-354 [213272]
      automated match to d1sdwa2
      complexed with cu, gol, ni, no2
  13. Domain(s) for 3mih:
    1. 2409932Domain d3miha1: 3mih A:47-198 [213273]
      automated match to d1sdwa1
      complexed with azi, cu, iod, na, ni
    2. 2409933Domain d3miha2: 3mih A:199-353 [213274]
      automated match to d1sdwa2
      complexed with azi, cu, iod, na, ni
  14. Domain(s) for 3mlj:
    1. 2409912Domain d3mlja1: 3mlj A:46-198 [213326]
      automated match to d1sdwa1
      complexed with act, cmo, cu, gol, ni
    2. 2409913Domain d3mlja2: 3mlj A:199-355 [213327]
      automated match to d1sdwa2
      complexed with act, cmo, cu, gol, ni
  15. Domain(s) for 3mlk:
    1. 2409934Domain d3mlka1: 3mlk A:46-198 [247735]
      automated match to d1sdwa1
      complexed with cu, ni, no2
    2. 2409935Domain d3mlka2: 3mlk A:199-354 [247736]
      automated match to d1phma2
      complexed with cu, ni, no2
  16. Domain(s) for 3phm:
    1. 2409916Domain d3phma1: 3phm A:45-198 [59060]
      complexed with azi, cu, gol, ni
    2. 2409917Domain d3phma2: 3phm A:199-354 [59061]
      complexed with azi, cu, gol, ni
  17. Domain(s) for 4e4z:
    1. 2409926Domain d4e4za1: 4e4z A:45-198 [220305]
      automated match to d1yi9a1
      complexed with cu, gol, ni, peo
    2. 2409927Domain d4e4za2: 4e4z A:199-356 [220306]
      automated match to d1yi9a2
      complexed with cu, gol, ni, peo
  18. Domain(s) for 5wja:
    1. 3054941Domain d5wjaa1: 5wja A:50-198 [355003]
      automated match to d1sdwa1
      complexed with cu, flc, gol, ni
    2. 3054942Domain d5wjaa2: 5wja A:199-354 [355004]
      automated match to d1phma2
      complexed with cu, flc, gol, ni
    3. 3054996Domain d5wjad1: 5wja D:45-198 [355058]
      automated match to d1sdwa1
      complexed with cu, flc, gol, ni
    4. 3054997Domain d5wjad2: 5wja D:199-355 [355059]
      automated match to d1phma2
      complexed with cu, flc, gol, ni
  19. Domain(s) for 5wkw:
    1. 3054986Domain d5wkwa1: 5wkw A:45-198 [355048]
      automated match to d1sdwa1
      complexed with gol, peg
    2. 3054987Domain d5wkwa2: 5wkw A:199-356 [355049]
      automated match to d1phma2
      complexed with gol, peg
  20. Domain(s) for 5wm0:
    1. 3055003Domain d5wm0a1: 5wm0 A:46-198 [355065]
      automated match to d1sdwa1
    2. 3055004Domain d5wm0a2: 5wm0 A:199-355 [355066]
      automated match to d1phma2
  21. Domain(s) for 6ala:
    1. 3054766Domain d6alaa1: 6ala A:60-198 [354828]
      automated match to d1sdwa1
      complexed with cu, flc, gol
    2. 3054770Domain d6alaa2: 6ala A:199-356 [354832]
      automated match to d1phma2
      complexed with cu, flc, gol
    3. 3054861Domain d6alac1: 6ala C:53-198 [354923]
      automated match to d1sdwa1
      complexed with cu, flc, gol
    4. 3054862Domain d6alac2: 6ala C:199-356 [354924]
      automated match to d1phma2
      complexed with cu, flc, gol
  22. Domain(s) for 6amp:
    1. 3054760Domain d6ampa1: 6amp A:46-198 [354822]
      automated match to d1sdwa1
      complexed with cu
    2. 3054769Domain d6ampa2: 6amp A:199-355 [354831]
      automated match to d1phma2
      complexed with cu
  23. Domain(s) for 6an3:
    1. 3054899Domain d6an3a1: 6an3 A:47-198 [354961]
      automated match to d1sdwa1
      complexed with cu, peg; mutant
    2. 3054900Domain d6an3a2: 6an3 A:199-356 [354962]
      automated match to d1phma2
      complexed with cu, peg; mutant
  24. Domain(s) for 6ao6:
    1. 3054833Domain d6ao6a1: 6ao6 A:45-198 [354895]
      automated match to d1sdwa1
      complexed with cu, gol, ni
    2. 3054834Domain d6ao6a2: 6ao6 A:199-354 [354896]
      automated match to d1phma2
      complexed with cu, gol, ni
  25. Domain(s) for 6ay0:
    1. 3054761Domain d6ay0a1: 6ay0 A:47-198 [354825]
      automated match to d1sdwa1
      complexed with cu
    2. 3054768Domain d6ay0a2: 6ay0 A:199-355 [354830]
      automated match to d1phma2
      complexed with cu

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.121.1.2 Peptidylglycine alpha-hydroxylating monooxygenase, PHM

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.121.1.2 Peptidylglycine alpha-hydroxylating monooxygenase, PHM: