SCOPe 2.08: Protein: Iron-dependent regulator IdeR

Lineage for Protein: Iron-dependent regulator IdeR

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
contains a small beta-sheet (wing)
Family a.4.5.24: Iron-dependent repressor protein [46882] (4 proteins)
automatically mapped to Pfam PF01325
Protein Iron-dependent regulator IdeR [46885] (1 species)

Species:

Mycobacterium tuberculosis [TaxId:1773] [46886] (6 PDB entries)
Uniprot Q50495

Domain for 1b1b:
- Domain d1b1ba1: 1b1b A:1-64 [16215]
  Other proteins in same PDB: d1b1ba2
  complexed with so4, zn
Domains for 1fx7:
1. Domain d1fx7a1: 1fx7 A:1-64 [60088]
  Other proteins in same PDB: d1fx7a2, d1fx7a3, d1fx7b2, d1fx7b3, d1fx7c2, d1fx7c3, d1fx7d2, d1fx7d3
  complexed with co, so4
2. Domain d1fx7b1: 1fx7 B:1-64 [60091]
  Other proteins in same PDB: d1fx7a2, d1fx7a3, d1fx7b2, d1fx7b3, d1fx7c2, d1fx7c3, d1fx7d2, d1fx7d3
  complexed with co, so4
3. Domain d1fx7c1: 1fx7 C:1-64 [60094]
  Other proteins in same PDB: d1fx7a2, d1fx7a3, d1fx7b2, d1fx7b3, d1fx7c2, d1fx7c3, d1fx7d2, d1fx7d3
  complexed with co, so4
4. Domain d1fx7d1: 1fx7 D:1-64 [60097]
  Other proteins in same PDB: d1fx7a2, d1fx7a3, d1fx7b2, d1fx7b3, d1fx7c2, d1fx7c3, d1fx7d2, d1fx7d3
  complexed with co, so4

Domains for 1u8r:

Domain d1u8ra1: 1u8r A:1-64 [113168]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8rb1: 1u8r B:1-64 [113171]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8rc1: 1u8r C:1-64 [113174]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8rd1: 1u8r D:1-64 [113177]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8rg1: 1u8r G:1-64 [113180]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8rh1: 1u8r H:1-64 [113183]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8ri1: 1u8r I:1-64 [113186]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domain d1u8rj1: 1u8r J:1-64 [113189]
Other proteins in same PDB: d1u8ra2, d1u8ra3, d1u8rb2, d1u8rb3, d1u8rc2, d1u8rc3, d1u8rd2, d1u8rd3, d1u8rg2, d1u8rg3, d1u8rh2, d1u8rh3, d1u8ri2, d1u8ri3, d1u8rj2, d1u8rj3
protein/DNA complex; complexed with co, na

Domains for 2isy:
1. Domain d2isya1: 2isy A:2-64 [137612]
  Other proteins in same PDB: d2isya2, d2isya3, d2isyb2, d2isyb3
  automated match to d1fx7a1
  complexed with ni, po4
2. Domain d2isyb1: 2isy B:2-64 [137614]
  Other proteins in same PDB: d2isya2, d2isya3, d2isyb2, d2isyb3
  automated match to d1fx7a1
  complexed with ni, po4
Domains for 2isz:
1. Domain d2isza1: 2isz A:1-64 [137616]
  Other proteins in same PDB: d2isza2, d2iszb2, d2iszc2, d2iszd2
  automated match to d1fx7a1
  protein/DNA complex; complexed with na, ni
2. Domain d2iszb1: 2isz B:1-64 [137618]
  Other proteins in same PDB: d2isza2, d2iszb2, d2iszc2, d2iszd2
  automated match to d1fx7a1
  protein/DNA complex; complexed with na, ni
3. Domain d2iszc1: 2isz C:1-64 [137620]
  Other proteins in same PDB: d2isza2, d2iszb2, d2iszc2, d2iszd2
  automated match to d1fx7a1
  protein/DNA complex; complexed with na, ni
4. Domain d2iszd1: 2isz D:1-64 [137622]
  Other proteins in same PDB: d2isza2, d2iszb2, d2iszc2, d2iszd2
  automated match to d1fx7a1
  protein/DNA complex; complexed with na, ni
Domains for 2it0:
1. Domain d2it0a1: 2it0 A:3-64 [137624]
  Other proteins in same PDB: d2it0a2, d2it0a3, d2it0b2, d2it0b3, d2it0c2, d2it0d2
  automated match to d1fx7a1
  protein/DNA complex; complexed with act, ni
2. Domain d2it0b1: 2it0 B:3-64 [137626]
  Other proteins in same PDB: d2it0a2, d2it0a3, d2it0b2, d2it0b3, d2it0c2, d2it0d2
  automated match to d1fx7a1
  protein/DNA complex; complexed with act, ni
3. Domain d2it0c1: 2it0 C:3-64 [137628]
  Other proteins in same PDB: d2it0a2, d2it0a3, d2it0b2, d2it0b3, d2it0c2, d2it0d2
  automated match to d1fx7a1
  protein/DNA complex; complexed with act, ni
4. Domain d2it0d1: 2it0 D:3-64 [137630]
  Other proteins in same PDB: d2it0a2, d2it0a3, d2it0b2, d2it0b3, d2it0c2, d2it0d2
  automated match to d1fx7a1
  protein/DNA complex; complexed with act, ni

More info for Protein Iron-dependent regulator IdeR from a.4.5.24: Iron-dependent repressor protein

Timeline for Protein Iron-dependent regulator IdeR from a.4.5.24: Iron-dependent repressor protein:

Protein Iron-dependent regulator IdeR from a.4.5.24: Iron-dependent repressor protein first appeared (with stable ids) in SCOP 1.55, called Protein Iron-dependent regulator from a.4.5.24: Iron-dependent represor protein
Protein Iron-dependent regulator IdeR from a.4.5.24: Iron-dependent repressor protein appears in SCOPe 2.07