SCOP 1.71: Species: Corynebacterium diphtheriae

Lineage for Species: Corynebacterium diphtheriae

Root: SCOP 1.71
Class a: All alpha proteins [46456] (226 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (61 families)
contains a small beta-sheet (wing)
Family a.4.5.24: Iron-dependent repressor protein [46882] (3 proteins)
Protein Diphtheria toxin repressor (DtxR) [46883] (1 species)
Species Corynebacterium diphtheriae [TaxId:1717] [46884] (16 PDB entries)

PDB entries in Species: Corynebacterium diphtheriae:

Domain(s) for 1bi0:
- Domain d1bi0_1: 1bi0 4-64 [16202]
  Other proteins in same PDB: d1bi0_2, d1bi0_3
  complexed with so4, zn
Domain(s) for 1bi1:
- Domain d1bi1_1: 1bi1 4-64 [16196]
  Other proteins in same PDB: d1bi1_2, d1bi1_3
Domain(s) for 1bi2:
1. Domain d1bi2a1: 1bi2 A:3-64 [16197]
  Other proteins in same PDB: d1bi2a2, d1bi2a3, d1bi2b2
2. Domain d1bi2b1: 1bi2 B:3-64 [16198]
  Other proteins in same PDB: d1bi2a2, d1bi2a3, d1bi2b2
Domain(s) for 1bi3:
1. Domain d1bi3a1: 1bi3 A:4-64 [16199]
  Other proteins in same PDB: d1bi3a2, d1bi3a3, d1bi3b2
2. Domain d1bi3b1: 1bi3 B:4-64 [16200]
  Other proteins in same PDB: d1bi3a2, d1bi3a3, d1bi3b2
  complexed with so4, zn
Domain(s) for 1c0w:
1. Domain d1c0wa1: 1c0w A:2-64 [16211]
  Other proteins in same PDB: d1c0wa2, d1c0wa3, d1c0wb2, d1c0wb3, d1c0wc2, d1c0wc3, d1c0wd2, d1c0wd3
2. Domain d1c0wb1: 1c0w B:2-64 [16212]
  Other proteins in same PDB: d1c0wa2, d1c0wa3, d1c0wb2, d1c0wb3, d1c0wc2, d1c0wc3, d1c0wd2, d1c0wd3
3. Domain d1c0wc1: 1c0w C:2-64 [16213]
  Other proteins in same PDB: d1c0wa2, d1c0wa3, d1c0wb2, d1c0wb3, d1c0wc2, d1c0wc3, d1c0wd2, d1c0wd3
4. Domain d1c0wd1: 1c0w D:2-64 [16214]
  Other proteins in same PDB: d1c0wa2, d1c0wa3, d1c0wb2, d1c0wb3, d1c0wc2, d1c0wc3, d1c0wd2, d1c0wd3
  protein/DNA complex; complexed with co
Domain(s) for 1ddn:
1. Domain d1ddna1: 1ddn A:3-64 [16207]
  Other proteins in same PDB: d1ddna2, d1ddnb2, d1ddnc2, d1ddnd2
2. Domain d1ddnb1: 1ddn B:3-64 [16208]
  Other proteins in same PDB: d1ddna2, d1ddnb2, d1ddnc2, d1ddnd2
3. Domain d1ddnc1: 1ddn C:3-64 [16209]
  Other proteins in same PDB: d1ddna2, d1ddnb2, d1ddnc2, d1ddnd2
4. Domain d1ddnd1: 1ddn D:3-64 [16210]
  Other proteins in same PDB: d1ddna2, d1ddnb2, d1ddnc2, d1ddnd2
  protein/DNA complex; complexed with ni; mutant
Domain(s) for 1dpr:
1. Domain d1dpra1: 1dpr A:3-64 [16194]
  Other proteins in same PDB: d1dpra2, d1dprb2
2. Domain d1dprb1: 1dpr B:3-64 [16195]
  Other proteins in same PDB: d1dpra2, d1dprb2
Domain(s) for 1f5t:
1. Domain d1f5ta1: 1f5t A:1002-1064 [16203]
  Other proteins in same PDB: d1f5ta2, d1f5tb2, d1f5tc2, d1f5td2
2. Domain d1f5tb1: 1f5t B:2002-2064 [16204]
  Other proteins in same PDB: d1f5ta2, d1f5tb2, d1f5tc2, d1f5td2
3. Domain d1f5tc1: 1f5t C:3002-3064 [16205]
  Other proteins in same PDB: d1f5ta2, d1f5tb2, d1f5tc2, d1f5td2
4. Domain d1f5td1: 1f5t D:4002-4064 [16206]
  Other proteins in same PDB: d1f5ta2, d1f5tb2, d1f5tc2, d1f5td2
  protein/DNA complex; complexed with ni; mutant
Domain(s) for 1fwz:
- Domain d1fwza1: 1fwz A:4-64 [60077]
  Other proteins in same PDB: d1fwza2, d1fwza3
  complexed with so4, zn; mutant
Domain(s) for 1g3s:
- Domain d1g3sa1: 1g3s A:4-64 [65124]
  Other proteins in same PDB: d1g3sa2, d1g3sa3
  mutant
Domain(s) for 1g3t:
1. Domain d1g3ta1: 1g3t A:3-64 [65127]
  Other proteins in same PDB: d1g3ta2, d1g3ta3, d1g3tb2
2. Domain d1g3tb1: 1g3t B:1003-1064 [65130]
  Other proteins in same PDB: d1g3ta2, d1g3ta3, d1g3tb2
  mutant
Domain(s) for 1g3w:
- Domain d1g3wa1: 1g3w A:4-64 [65133]
  Other proteins in same PDB: d1g3wa2, d1g3wa3
  complexed with cd, so4; mutant
Domain(s) for 1g3y:
- Domain d1g3ya1: 1g3y A:3-64 [65136]
  Other proteins in same PDB: d1g3ya2, d1g3ya3
  complexed with zn; mutant
Domain(s) for 1p92:
- Domain d1p92a1: 1p92 A:1-64 [104085]
  Other proteins in same PDB: d1p92a2, d1p92a3
  complexed with bme; mutant
Domain(s) for 2dtr:
- Domain d2dtr_1: 2dtr 4-64 [16193]
  Other proteins in same PDB: d2dtr_2, d2dtr_3
  complexed with co, so4
Domain(s) for 2tdx:
- Domain d2tdx_1: 2tdx 1-64 [16201]
  Other proteins in same PDB: d2tdx_2
  complexed with ni; mutant

More info for Species Corynebacterium diphtheriae [TaxId:1717] from a.4.5.24 Diphtheria toxin repressor (DtxR)

Timeline for Species Corynebacterium diphtheriae [TaxId:1717] from a.4.5.24 Diphtheria toxin repressor (DtxR):

Species Corynebacterium diphtheriae [TaxId:1717] from a.4.5.24 Diphtheria toxin repressor (DtxR) first appeared (with stable ids) in SCOP 1.55
Species Corynebacterium diphtheriae [TaxId:1717] from a.4.5.24 Diphtheria toxin repressor (DtxR) appears in SCOP 1.69
Species Corynebacterium diphtheriae [TaxId:1717] from a.4.5.24 Diphtheria toxin repressor (DtxR) appears in SCOP 1.73
Species Corynebacterium diphtheriae [TaxId:1717] from a.4.5.24 Diphtheria toxin repressor (DtxR) appears in the current release, SCOPe 2.08