SCOPe 2.08: Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
parallel beta-sheet of 6 strands, order 213456
Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
Similar in architecture to the superfamily II but partly differs in topology
Family c.93.1.1: L-arabinose binding protein-like [53823] (18 proteins)
has additional insertions and/or extensions that are not grouped together
Protein automated matches [190296] (11 species)
not a true protein
Species Norway rat (Rattus norvegicus) [TaxId:10116] [267861] (7 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

Domain(s) for 3o21:
1. Domain d3o21a_: 3o21 A: [265101]
  automated match to d3h5va_
  complexed with nag, po4
2. Domain d3o21b_: 3o21 B: [265102]
  automated match to d3h5va_
  complexed with nag, po4
3. Domain d3o21c_: 3o21 C: [265103]
  automated match to d3h5va_
  complexed with nag, po4
4. Domain d3o21d_: 3o21 D: [265104]
  automated match to d3h5va_
  complexed with nag, po4
Domain(s) for 3saj:
1. Domain d3saja1: 3saj A:4-374 [265346]
  Other proteins in same PDB: d3saja2, d3saja3, d3sajb2, d3sajc2, d3sajd2
  automated match to d3h5va_
  complexed with nag
2. Domain d3sajb1: 3saj B:4-373 [265347]
  Other proteins in same PDB: d3saja2, d3saja3, d3sajb2, d3sajc2, d3sajd2
  automated match to d3h5va_
  complexed with nag
3. Domain d3sajc1: 3saj C:4-373 [265348]
  Other proteins in same PDB: d3saja2, d3saja3, d3sajb2, d3sajc2, d3sajd2
  automated match to d3h5va_
  complexed with nag
4. Domain d3sajd1: 3saj D:4-373 [265349]
  Other proteins in same PDB: d3saja2, d3saja3, d3sajb2, d3sajc2, d3sajd2
  automated match to d3h5va_
  complexed with nag
Domain(s) for 4gpa:
- Domain d4gpaa_: 4gpa A: [266333]
  automated match to d3h5va_
  complexed with nag
Domain(s) for 5fwx:
1. Domain d5fwxa_: 5fwx A: [315396]
  automated match to d3hsyb_
  complexed with nag, so4
2. Domain d5fwxb_: 5fwx B: [314608]
  automated match to d4gpaa_
  complexed with nag, so4
3. Domain d5fwxc_: 5fwx C: [314618]
  automated match to d3hsyb_
  complexed with nag, so4
4. Domain d5fwxd_: 5fwx D: [314605]
  automated match to d4gpaa_
  complexed with nag, so4
Domain(s) for 5fwy:
1. Domain d5fwya_: 5fwy A: [314562]
  Other proteins in same PDB: d5fwyb2
  automated match to d3hsyb_
  complexed with gol, nag, so4
2. Domain d5fwyb1: 5fwy B:2-381 [314535]
  Other proteins in same PDB: d5fwyb2
  automated match to d3o21a_
  complexed with gol, nag, so4
3. Domain d5fwyc_: 5fwy C: [314559]
  Other proteins in same PDB: d5fwyb2
  automated match to d3hsyb_
  complexed with gol, nag, so4
4. Domain d5fwyd_: 5fwy D: [314556]
  Other proteins in same PDB: d5fwyb2
  automated match to d3o21a_
  complexed with gol, nag, so4
Domain(s) for 6flr:
1. Domain d6flra_: 6flr A: [361396]
  automated match to d3o21a_
  complexed with nag
2. Domain d6flrb_: 6flr B: [361401]
  automated match to d3o21a_
  complexed with nag
Domain(s) for 6fpj:
1. Domain d6fpja_: 6fpj A: [361399]
  automated match to d3o21a_
  complexed with dms, gol, nag, po4
2. Domain d6fpjb_: 6fpj B: [361394]
  automated match to d3o21a_
  complexed with dms, gol, nag, po4
3. Domain d6fpjc_: 6fpj C: [361398]
  automated match to d3o21a_
  complexed with dms, gol, nag, po4

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.93.1.1 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.93.1.1 automated matches:

Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.93.1.1 automated matches first appeared in SCOPe 2.05
Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.93.1.1 automated matches appears in SCOPe 2.07