Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3039230Class h: Coiled coil proteins [57942] (7 folds)
  3. 3039231Fold h.1: Parallel coiled-coil [57943] (41 superfamilies)
    this is not a true fold; includes oligomers of shorter identical helices
  4. 3040219Superfamily h.1.15: SNARE fusion complex [58038] (2 families) (S)
    tetrameric parallel coiled coil
  5. 3040220Family h.1.15.1: SNARE fusion complex [58039] (12 proteins)
  6. 3040322Protein automated matches [254664] (2 species)
    not a true protein

Species:

  1. 3040323Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255760] (1 PDB entry)
  2. 3040327Norway rat (Rattus norvegicus) [TaxId:10116] [256060] (5 PDB entries)
    1. Domain for 2n1t:
    2. Domains for 3rk2:
      1. 3040328Domain d3rk2b1: 3rk2 B:191-248 [249132]
        Other proteins in same PDB: d3rk2b2, d3rk2c1, d3rk2c2, d3rk2d1, d3rk2d2, d3rk2f2, d3rk2g1, d3rk2g2, d3rk2h1, d3rk2h2
        automated match to d1n7sb_
        complexed with ca
      2. 3040329Domain d3rk2f1: 3rk2 F:191-248 [249135]
        Other proteins in same PDB: d3rk2b2, d3rk2c1, d3rk2c2, d3rk2d1, d3rk2d2, d3rk2f2, d3rk2g1, d3rk2g2, d3rk2h1, d3rk2h2
        automated match to d1n7sb_
        complexed with ca
    3. Domain for 5w5c:
    4. Domain for 5w5d:
    5. Domains for 6wvw:
      1. 3040330Domain d6wvwa_: 6wvw A: [402766]
        Other proteins in same PDB: d6wvwc_, d6wvwd_, d6wvwe2, d6wvwg_, d6wvwh_
        automated match to d1sfce_
        complexed with ca, mpd
      2. 3040331Domain d6wvwb_: 6wvw B: [402753]
        Other proteins in same PDB: d6wvwc_, d6wvwd_, d6wvwe2, d6wvwg_, d6wvwh_
        automated match to d1sfcf_
        complexed with ca, mpd
      3. 3040332Domain d6wvwe1: 6wvw E:28-89 [402762]
        Other proteins in same PDB: d6wvwc_, d6wvwd_, d6wvwe2, d6wvwg_, d6wvwh_
        automated match to d1sfce_
        complexed with ca, mpd
      4. 3040333Domain d6wvwf_: 6wvw F: [402746]
        Other proteins in same PDB: d6wvwc_, d6wvwd_, d6wvwe2, d6wvwg_, d6wvwh_
        automated match to d1sfcf_
        complexed with ca, mpd

More info for Protein automated matches from h.1.15.1: SNARE fusion complex

Timeline for Protein automated matches from h.1.15.1: SNARE fusion complex: