Class d: Alpha and beta proteins (a+b) [53931] (385 folds) |
Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies) core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids |
Superfamily d.41.3: Pyrimidine nucleoside phosphorylase C-terminal domain [54680] (2 families) |
Family d.41.3.0: automated matches [254277] (1 protein) not a true family |
Protein automated matches [254643] (5 species) not a true protein |
Bacillus subtilis [TaxId:224308] [326395] (1 PDB entry) |
Domain d5ep8a3: 5ep8 A:331-433 [326396] Other proteins in same PDB: d5ep8a1, d5ep8a2, d5ep8b1, d5ep8b2 automated match to d3h5qa3 complexed with na, so4 |
Domain d5ep8b3: 5ep8 B:331-433 [326399] Other proteins in same PDB: d5ep8a1, d5ep8a2, d5ep8b1, d5ep8b2 automated match to d3h5qa3 complexed with na, so4 |
Human (Homo sapiens) [TaxId:9606] [255654] (2 PDB entries) |
Domain d2wk5a3: 2wk5 A:374-480 [244154] Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2 automated match to d1uoua3 complexed with gol |
Domain d2wk5b3: 2wk5 B:374-481 [244157] Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2 automated match to d1uoua3 complexed with gol |
Domain d2wk5c3: 2wk5 C:374-480 [244160] Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2 automated match to d1uoua3 complexed with gol |
Domain d2wk5d3: 2wk5 D:374-480 [244163] Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2 automated match to d1uoua3 complexed with gol |
Salmonella enterica [TaxId:90371] [311686] (2 PDB entries) |
Domain d4xr5a3: 4xr5 A:336-440 [311894] Other proteins in same PDB: d4xr5a1, d4xr5a2, d4xr5b1, d4xr5b2 automated match to d4x46b3 complexed with cl, peg, pge |
Domain d4xr5b3: 4xr5 B:336-440 [311687] Other proteins in same PDB: d4xr5a1, d4xr5a2, d4xr5b1, d4xr5b2 automated match to d4x46b3 complexed with cl, peg, pge |
Domain d4yeka3: 4yek A:336-440 [311992] Other proteins in same PDB: d4yeka1, d4yeka2, d4yekb1, d4yekb2 automated match to d4x46b3 complexed with edo, gol, pge, so4, thm |
Domain d4yekb3: 4yek B:336-440 [311976] Other proteins in same PDB: d4yeka1, d4yeka2, d4yekb1, d4yekb2 automated match to d4x46b3 complexed with edo, gol, pge, so4, thm |
Salmonella typhimurium [TaxId:99287] [311467] (3 PDB entries) |
Domain d4x46a3: 4x46 A:336-440 [309958] Other proteins in same PDB: d4x46a1, d4x46a2, d4x46b1, d4x46b2 automated match to d4eada3 complexed with edo, so4 |
Domain d4x46b3: 4x46 B:336-440 [309961] Other proteins in same PDB: d4x46a1, d4x46a2, d4x46b1, d4x46b2 automated match to d4eada3 complexed with edo, so4 |
Domain d4yyya3: 4yyy A:336-440 [312282] Other proteins in same PDB: d4yyya1, d4yyya2, d4yyyb1, d4yyyb2 automated match to d4x46b3 complexed with cit, pge, uri |
Domain d4yyyb3: 4yyy B:336-440 [312206] Other proteins in same PDB: d4yyya1, d4yyya2, d4yyyb1, d4yyyb2 automated match to d4x46b3 complexed with cit, pge, uri |
Domain d5ey3a3: 5ey3 A:336-440 [326879] Other proteins in same PDB: d5ey3a1, d5ey3a2, d5ey3a4, d5ey3b1, d5ey3b2 automated match to d4x46b3 complexed with ctn, edo, gol, so4 |
Domain d5ey3b3: 5ey3 B:336-440 [326885] Other proteins in same PDB: d5ey3a1, d5ey3a2, d5ey3a4, d5ey3b1, d5ey3b2 automated match to d4x46b3 complexed with ctn, edo, gol, so4 |
Staphylococcus aureus [TaxId:93062] [255860] (1 PDB entry) |
Timeline for Protein automated matches from d.41.3.0: automated matches: