SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
Superfamily d.41.3: Pyrimidine nucleoside phosphorylase C-terminal domain [54680] (2 families)
Family d.41.3.0: automated matches [254277] (1 protein)
not a true family
Protein automated matches [254643] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [255654] (2 PDB entries)
1. Domains for 2wk5:
  1. Domain d2wk5a3: 2wk5 A:374-480 [244154]
    Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2
    automated match to d1uoua3
    complexed with gol
  2. Domain d2wk5b3: 2wk5 B:374-481 [244157]
    Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2
    automated match to d1uoua3
    complexed with gol
  3. Domain d2wk5c3: 2wk5 C:374-480 [244160]
    Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2
    automated match to d1uoua3
    complexed with gol
  4. Domain d2wk5d3: 2wk5 D:374-480 [244163]
    Other proteins in same PDB: d2wk5a1, d2wk5a2, d2wk5b1, d2wk5b2, d2wk5c1, d2wk5c2, d2wk5d1, d2wk5d2
    automated match to d1uoua3
    complexed with gol
2. Domains for 2wk6:
  1. Domain d2wk6a3: 2wk6 A:374-481 [244166]
    Other proteins in same PDB: d2wk6a1, d2wk6a2, d2wk6b1, d2wk6b2
    automated match to d1uoua3
    complexed with iur
  2. Domain d2wk6b3: 2wk6 B:374-481 [244169]
    Other proteins in same PDB: d2wk6a1, d2wk6a2, d2wk6b1, d2wk6b2
    automated match to d1uoua3
    complexed with iur
Staphylococcus aureus [TaxId:93062] [255860] (1 PDB entry)
- Domain for 3h5q:
  - Domain d3h5qa3: 3h5q A:331-433 [246471]
    Other proteins in same PDB: d3h5qa1, d3h5qa2
    automated match to d1brwa3
    complexed with so4, thm

More info for Protein automated matches from d.41.3.0: automated matches

Timeline for Protein automated matches from d.41.3.0: automated matches:

Protein automated matches from d.41.3.0: automated matches first appeared in SCOPe 2.04
Protein automated matches from d.41.3.0: automated matches appears in SCOPe 2.06
Protein automated matches from d.41.3.0: automated matches appears in the current release, SCOPe 2.08