Species:

1. Brucella melitensis [TaxId:224914] [226367] (1 PDB entry)

   • Domains for 4em6:

     1. Domain d4em6a_: 4em6 A: [220642] automated match to d1t10a_ complexed with ca, cl, edo

     2. Domain d4em6b_: 4em6 B: [220643] automated match to d1t10a_ complexed with ca, cl, edo

     3. Domain d4em6c_: 4em6 C: [220644] automated match to d1t10a_ complexed with ca, cl, edo

     4. Domain d4em6d_: 4em6 D: [220645] automated match to d1t10a_ complexed with ca, cl, edo

2. Burkholderia pseudomallei [TaxId:272560] [189351] (5 PDB entries)

   1. Domains for 2x3y:

      1. Domain d2x3ya1: 2x3y A:1-195 [207123] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      2. Domain d2x3yb_: 2x3y B: [207124] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      3. Domain d2x3yc_: 2x3y C: [207125] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      4. Domain d2x3yd_: 2x3y D: [207126] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      5. Domain d2x3ye_: 2x3y E: [207127] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      6. Domain d2x3yf_: 2x3y F: [207128] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      7. Domain d2x3yg_: 2x3y G: [207129] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

      8. Domain d2x3yh_: 2x3y H: [207130] Other proteins in same PDB: d2x3ya2 automated match to d3bjzc_ complexed with zn

   2. Domains for 2xbl:

      1. Domain d2xbla_: 2xbl A: [169993] automated match to d1tk9a_ complexed with m7p, peg, pg4, pge, zn

      2. Domain d2xblb_: 2xbl B: [169994] automated match to d1tk9a_ complexed with m7p, peg, pg4, pge, zn

      3. Domain d2xblc_: 2xbl C: [169995] automated match to d1tk9a_ complexed with m7p, peg, pg4, pge, zn

      4. Domain d2xbld_: 2xbl D: [169996] automated match to d1tk9a_ complexed with m7p, peg, pg4, pge, zn

   3. Domains for 5ltz:

      1. Domain d5ltza_: 5ltz A: [342294] automated match to d2xbld_ complexed with edo, gol, i22, na, peg, pg4, pge, zn; mutant

      2. Domain d5ltzb_: 5ltz B: [342325] automated match to d2xbld_ complexed with edo, gol, i22, na, peg, pg4, pge, zn; mutant

      3. Domain d5ltzc_: 5ltz C: [342288] automated match to d2xbld_ complexed with edo, gol, i22, na, peg, pg4, pge, zn; mutant

      4. Domain d5ltzd_: 5ltz D: [342451] automated match to d2xbld_ complexed with edo, gol, i22, na, peg, pg4, pge, zn; mutant

   4. Domains for 5lu5:

      1. Domain d5lu5a_: 5lu5 A: [342297] automated match to d2xbld_ complexed with act, gol, m7p, mg, na, peg, pg4, pge

      2. Domain d5lu5b_: 5lu5 B: [342316] automated match to d2xbld_ complexed with act, gol, m7p, mg, na, peg, pg4, pge

      3. Domain d5lu5c_: 5lu5 C: [342353] automated match to d2xbld_ complexed with act, gol, m7p, mg, na, peg, pg4, pge

      4. Domain d5lu5d_: 5lu5 D: [342408] automated match to d2xbld_ complexed with act, gol, m7p, mg, na, peg, pg4, pge

   5. Domains for 5lu7:

      1. Domain d5lu7a_: 5lu7 A: [342298] automated match to d3bjzd_ complexed with edo, m7p, pg4, zn; mutant

      2. Domain d5lu7b_: 5lu7 B: [342356] automated match to d3bjzd_ complexed with edo, m7p, pg4, zn; mutant

      3. Domain d5lu7c_: 5lu7 C: [342415] automated match to d3bjzd_ complexed with edo, m7p, pg4, zn; mutant

      4. Domain d5lu7d_: 5lu7 D: [342335] automated match to d3bjzd_ complexed with edo, m7p, pg4, zn; mutant

3. Burkholderia pseudomallei [TaxId:28450] [342290] (1 PDB entry)

   • Domains for 5lu6:

     1. Domain d5lu6a_: 5lu6 A: [342291] automated match to d3bjzd_ complexed with edo, gol, i22, pge; mutant

     2. Domain d5lu6b_: 5lu6 B: [342292] automated match to d3bjzd_ complexed with edo, gol, i22, pge; mutant

     3. Domain d5lu6c_: 5lu6 C: [342293] automated match to d3bjzd_ complexed with edo, gol, i22, pge; mutant

     4. Domain d5lu6d_: 5lu6 D: [342296] automated match to d3bjzd_ complexed with edo, gol, i22, pge; mutant

4. Candida albicans [TaxId:237561] [194423] (4 PDB entries)

   1. Domains for 2poc:

      1. Domain d2poca_: 2poc A: [198256] automated match to d2pocd_ complexed with act, bg6, na, ud1

      2. Domain d2pocb_: 2poc B: [198257] automated match to d2pocd_ complexed with act, bg6, na, ud1

      3. Domain d2pocc_: 2poc C: [198258] automated match to d2pocd_ complexed with act, bg6, na, ud1

      4. Domain d2pocd_: 2poc D: [194424] automated match to d1moqa_ complexed with act, bg6, na, ud1

   2. Domains for 2put:

      1. Domain d2puta_: 2put A: [205645] automated match to d2pocd_ complexed with act, f6r, na, ud1

      2. Domain d2putb_: 2put B: [205646] automated match to d2pocd_ complexed with act, f6r, na, ud1

      3. Domain d2putc_: 2put C: [205647] automated match to d2pocd_ complexed with act, f6r, na, ud1

      4. Domain d2putd_: 2put D: [205648] automated match to d2pocd_ complexed with act, f6r, na, ud1

   3. Domains for 2puv:

      1. Domain d2puva_: 2puv A: [205649] automated match to d2pocd_ complexed with act, m6r, na, ud1

      2. Domain d2puvb_: 2puv B: [205650] automated match to d2pocd_ complexed with act, m6r, na, ud1

      3. Domain d2puvc_: 2puv C: [205651] automated match to d2pocd_ complexed with act, m6r, na, ud1

      4. Domain d2puvd_: 2puv D: [205652] automated match to d2pocd_ complexed with act, m6r, na, ud1

   4. Domains for 2puw:

      1. Domain d2puwa_: 2puw A: [243498] automated match to d2zj3a_ complexed with bg6, cl

      2. Domain d2puwb_: 2puw B: [243499] automated match to d2zj3a_ complexed with bg6, cl

5. Clostridium difficile [TaxId:272563] [232242] (1 PDB entry)

   • Domains for 3g68:

     1. Domain d3g68a1: 3g68 A:1-344 [232243] Other proteins in same PDB: d3g68a2, d3g68b2 automated match to d3knzf_ complexed with cit, edo

     2. Domain d3g68b1: 3g68 B:1-350 [232244] Other proteins in same PDB: d3g68a2, d3g68b2 automated match to d3knzf_ complexed with cit, edo

6. Escherichia coli [TaxId:562] [226782] (2 PDB entries)

   1. Domains for 2i22:

      1. Domain d2i22a_: 2i22 A: [204686] automated match to d2xblb_ complexed with i22

      2. Domain d2i22b_: 2i22 B: [204687] automated match to d2xblb_ complexed with i22

      3. Domain d2i22c_: 2i22 C: [204688] automated match to d2xblb_ complexed with i22

      4. Domain d2i22d_: 2i22 D: [204689] automated match to d2xblb_ complexed with i22

   2. Domains for 2i2w:

      1. Domain d2i2wa_: 2i2w A: [204691] automated match to d2xblb_ complexed with gol

      2. Domain d2i2wb_: 2i2w B: [204692] automated match to d2xblb_ complexed with gol

      3. Domain d2i2wc_: 2i2w C: [204693] automated match to d2xblb_ complexed with gol

      4. Domain d2i2wd_: 2i2w D: [204694] automated match to d2xblb_ complexed with gol

7. Francisella tularensis [TaxId:119856] [193630] (1 PDB entry)

   • Domains for 3trj:

     1. Domain d3trja_: 3trj A: [200864] automated match to d3trjd_

     2. Domain d3trjb_: 3trj B: [200865] automated match to d3trjd_

     3. Domain d3trjc_: 3trj C: [200866] automated match to d3trjd_

     4. Domain d3trjd_: 3trj D: [193631] automated match to d3bjzd_

8. Human (Homo sapiens) [TaxId:9606] [225537] (3 PDB entries)

   1. Domains for 2v4m:

      1. Domain d2v4ma_: 2v4m A: [206207] automated match to d1moqa_ complexed with cl, f6r

      2. Domain d2v4mb_: 2v4m B: [206208] automated match to d1moqa_ complexed with cl, f6r

      3. Domain d2v4mc_: 2v4m C: [206209] automated match to d1moqa_ complexed with cl, f6r

      4. Domain d2v4md_: 2v4m D: [206210] automated match to d1moqa_ complexed with cl, f6r

   2. Domain for 2zj3:

      • Domain d2zj3a_: 2zj3 A: [207864] automated match to d1moqa_ complexed with g6p

   3. Domain for 2zj4:

      • Domain d2zj4a_: 2zj4 A: [207865] automated match to d1moqa_ complexed with agp

9. Mycobacterium tuberculosis [TaxId:83332] [189097] (1 PDB entry)

   • Domain for 2wu8:

     • Domain d2wu8a_: 2wu8 A: [169637] automated match to d1dqra_ complexed with so4

10. Pyrococcus furiosus [TaxId:2261] [187527] (1 PDB entry)

    • Domains for 2cb0:

      1. Domain d2cb0a_: 2cb0 A: [163354] Other proteins in same PDB: d2cb0b2 automated match to d1j5xa_ complexed with gol

      2. Domain d2cb0b1: 2cb0 B:1-325 [163355] Other proteins in same PDB: d2cb0b2 automated match to d1j5xa_ complexed with gol

11. Pyrococcus horikoshii OT3 [TaxId:70601] [193200] (3 PDB entries)

    1. Domains for 2dec:

       1. Domain d2deca_: 2dec A: [197851] automated match to d2decb_ complexed with edo, na

       2. Domain d2decb_: 2dec B: [193201] automated match to d2cb0b_ complexed with edo, na

    2. Domains for 2df8:

       1. Domain d2df8a_: 2df8 A: [203975] automated match to d2decb_ complexed with edo, f1p

       2. Domain d2df8b_: 2df8 B: [203976] automated match to d2decb_ complexed with edo, f1p

    3. Domains for 2e5f:

       1. Domain d2e5fa_: 2e5f A: [204080] automated match to d2decb_ complexed with edo, po4

       2. Domain d2e5fb_: 2e5f B: [204081] automated match to d2decb_ complexed with edo, po4

12. Salmonella enterica [TaxId:90371] [196499] (1 PDB entry)

    • Domains for 3knz:

      1. Domain d3knza1: 3knz A:2-322 [199626] Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2 automated match to d3knzf_ complexed with etx, imd

      2. Domain d3knzb1: 3knz B:2-321 [199627] Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2 automated match to d3knzf_ complexed with etx, imd

      3. Domain d3knzc1: 3knz C:2-322 [199628] Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2 automated match to d3knzf_ complexed with etx, imd

      4. Domain d3knzd1: 3knz D:2-322 [199629] Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2 automated match to d3knzf_ complexed with etx, imd

      5. Domain d3knze1: 3knz E:2-322 [199630] Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2 automated match to d3knzf_ complexed with etx, imd

      6. Domain d3knzf1: 3knz F:2-322 [196500] Other proteins in same PDB: d3knza2, d3knzb2, d3knzc2, d3knzd2, d3knze2, d3knzf2 automated match to d2vf5x1 complexed with etx, imd

13. Shewanella denitrificans [TaxId:318161] [232451] (1 PDB entry)

    • Domains for 3hba:

      1. Domain d3hbaa_: 3hba A: [232452] automated match to d3fj1a_ complexed with cit, gol

      2. Domain d3hbab_: 3hba B: [232453] automated match to d3fj1a_ complexed with cit, gol

14. Silicibacter pomeroyi [TaxId:246200] [225589] (1 PDB entry)

    • Domains for 3fj1:

      1. Domain d3fj1a1: 3fj1 A:1-331 [209944] Other proteins in same PDB: d3fj1a2 automated match to d1mosa_ complexed with cl, edo

      2. Domain d3fj1b_: 3fj1 B: [209945] Other proteins in same PDB: d3fj1a2 automated match to d1mosa_ complexed with cl, edo

      3. Domain d3fj1c_: 3fj1 C: [232164] Other proteins in same PDB: d3fj1a2 automated match to d3fj1d_ complexed with cl, edo

      4. Domain d3fj1d_: 3fj1 D: [209946] Other proteins in same PDB: d3fj1a2 automated match to d1mosa_ complexed with cl, edo

15. Staphylococcus aureus [TaxId:46170] [270435] (1 PDB entry)

    • Domains for 4s1w:

      1. Domain d4s1wa_: 4s1w A: [270437] automated match to d1mosa_ complexed with peg

      2. Domain d4s1wb_: 4s1w B: [270436] automated match to d1mosa_ complexed with peg

16. Stenotrophomonas maltophilia [TaxId:40324] [394940] (1 PDB entry)

    • Domains for 7kqa:

      1. Domain d7kqaa1: 7kqa A:9-346 [394941] Other proteins in same PDB: d7kqaa2 automated match to d3hbab_ complexed with cit, gol

      2. Domain d7kqab_: 7kqa B: [394947] Other proteins in same PDB: d7kqaa2 automated match to d3hbab_ complexed with cit, gol

More info for Protein automated matches from c.80.1.0: automated matches

Timeline for Protein automated matches from c.80.1.0: automated matches:

• Protein automated matches from c.80.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.80.1.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from c.80.1.0: automated matches appears in the current release, SCOPe 2.08