Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2140243Fold c.80: SIS domain [53696] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 5 strands, order 21345
  4. 2140244Superfamily c.80.1: SIS domain [53697] (4 families) (S)
  5. 2140444Family c.80.1.0: automated matches [191405] (1 protein)
    not a true family
  6. 2140445Protein automated matches [190547] (14 species)
    not a true protein

Species:

  1. 2140446Brucella melitensis [TaxId:224914] [226367] (1 PDB entry)
  2. 2140451Burkholderia pseudomallei [TaxId:272560] [189351] (2 PDB entries)
    1. Domains for 2x3y:
      1. 2140456Domain d2x3ya1: 2x3y A:1-195 [207123]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      2. 2140457Domain d2x3yb_: 2x3y B: [207124]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      3. 2140458Domain d2x3yc_: 2x3y C: [207125]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      4. 2140459Domain d2x3yd_: 2x3y D: [207126]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      5. 2140460Domain d2x3ye_: 2x3y E: [207127]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      6. 2140461Domain d2x3yf_: 2x3y F: [207128]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      7. 2140462Domain d2x3yg_: 2x3y G: [207129]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
      8. 2140463Domain d2x3yh_: 2x3y H: [207130]
        Other proteins in same PDB: d2x3ya2
        automated match to d3bjzc_
        complexed with zn
    2. Domains for 2xbl:
      1. 2140452Domain d2xbla_: 2xbl A: [169993]
        automated match to d1tk9a_
        complexed with m7p, peg, pg4, pge, zn
      2. 2140453Domain d2xblb_: 2xbl B: [169994]
        automated match to d1tk9a_
        complexed with m7p, peg, pg4, pge, zn
      3. 2140454Domain d2xblc_: 2xbl C: [169995]
        automated match to d1tk9a_
        complexed with m7p, peg, pg4, pge, zn
      4. 2140455Domain d2xbld_: 2xbl D: [169996]
        automated match to d1tk9a_
        complexed with m7p, peg, pg4, pge, zn
  3. 2140464Candida albicans [TaxId:237561] [194423] (4 PDB entries)
    1. Domains for 2poc:
      1. 2140465Domain d2poca_: 2poc A: [198256]
        automated match to d2pocd_
        complexed with act, bg6, na, ud1
      2. 2140466Domain d2pocb_: 2poc B: [198257]
        automated match to d2pocd_
        complexed with act, bg6, na, ud1
      3. 2140467Domain d2pocc_: 2poc C: [198258]
        automated match to d2pocd_
        complexed with act, bg6, na, ud1
      4. 2140468Domain d2pocd_: 2poc D: [194424]
        automated match to d1moqa_
        complexed with act, bg6, na, ud1
    2. Domains for 2put:
      1. 2140469Domain d2puta_: 2put A: [205645]
        automated match to d2pocd_
        complexed with act, f6r, na, ud1
      2. 2140470Domain d2putb_: 2put B: [205646]
        automated match to d2pocd_
        complexed with act, f6r, na, ud1
      3. 2140471Domain d2putc_: 2put C: [205647]
        automated match to d2pocd_
        complexed with act, f6r, na, ud1
      4. 2140472Domain d2putd_: 2put D: [205648]
        automated match to d2pocd_
        complexed with act, f6r, na, ud1
    3. Domains for 2puv:
      1. 2140473Domain d2puva_: 2puv A: [205649]
        automated match to d2pocd_
        complexed with act, m6r, na, ud1
      2. 2140474Domain d2puvb_: 2puv B: [205650]
        automated match to d2pocd_
        complexed with act, m6r, na, ud1
      3. 2140475Domain d2puvc_: 2puv C: [205651]
        automated match to d2pocd_
        complexed with act, m6r, na, ud1
      4. 2140476Domain d2puvd_: 2puv D: [205652]
        automated match to d2pocd_
        complexed with act, m6r, na, ud1
    4. Domains for 2puw:
      1. 2140477Domain d2puwa_: 2puw A: [243498]
        automated match to d2zj3a_
        complexed with bg6, cl
      2. 2140478Domain d2puwb_: 2puw B: [243499]
        automated match to d2zj3a_
        complexed with bg6, cl
  4. 2140479Clostridium difficile [TaxId:272563] [232242] (1 PDB entry)
  5. 2140482Escherichia coli [TaxId:562] [226782] (2 PDB entries)
    1. Domains for 2i22:
      1. 2140487Domain d2i22a_: 2i22 A: [204686]
        automated match to d2xblb_
        complexed with i22
      2. 2140488Domain d2i22b_: 2i22 B: [204687]
        automated match to d2xblb_
        complexed with i22
      3. 2140489Domain d2i22c_: 2i22 C: [204688]
        automated match to d2xblb_
        complexed with i22
      4. 2140490Domain d2i22d_: 2i22 D: [204689]
        automated match to d2xblb_
        complexed with i22
    2. Domains for 2i2w:
      1. 2140483Domain d2i2wa_: 2i2w A: [204691]
        automated match to d2xblb_
        complexed with gol
      2. 2140484Domain d2i2wb_: 2i2w B: [204692]
        automated match to d2xblb_
        complexed with gol
      3. 2140485Domain d2i2wc_: 2i2w C: [204693]
        automated match to d2xblb_
        complexed with gol
      4. 2140486Domain d2i2wd_: 2i2w D: [204694]
        automated match to d2xblb_
        complexed with gol
  6. 2140491Francisella tularensis [TaxId:119856] [193630] (1 PDB entry)
  7. 2140496Human (Homo sapiens) [TaxId:9606] [225537] (3 PDB entries)
    1. Domains for 2v4m:
      1. 2140499Domain d2v4ma_: 2v4m A: [206207]
        automated match to d1moqa_
        complexed with cl, f6r
      2. 2140500Domain d2v4mb_: 2v4m B: [206208]
        automated match to d1moqa_
        complexed with cl, f6r
      3. 2140501Domain d2v4mc_: 2v4m C: [206209]
        automated match to d1moqa_
        complexed with cl, f6r
      4. 2140502Domain d2v4md_: 2v4m D: [206210]
        automated match to d1moqa_
        complexed with cl, f6r
    2. Domain for 2zj3:
    3. Domain for 2zj4:
  8. 2140503Mycobacterium tuberculosis [TaxId:83332] [189097] (1 PDB entry)
  9. 2140505Pyrococcus furiosus [TaxId:2261] [187527] (1 PDB entry)
  10. 2140508Pyrococcus horikoshii OT3 [TaxId:70601] [193200] (3 PDB entries)
    1. Domains for 2dec:
      1. 2140513Domain d2deca_: 2dec A: [197851]
        automated match to d2decb_
        complexed with edo, na
      2. 2140514Domain d2decb_: 2dec B: [193201]
        automated match to d2cb0b_
        complexed with edo, na
    2. Domains for 2df8:
      1. 2140511Domain d2df8a_: 2df8 A: [203975]
        automated match to d2decb_
        complexed with edo, f1p
      2. 2140512Domain d2df8b_: 2df8 B: [203976]
        automated match to d2decb_
        complexed with edo, f1p
    3. Domains for 2e5f:
      1. 2140509Domain d2e5fa_: 2e5f A: [204080]
        automated match to d2decb_
        complexed with edo, po4
      2. 2140510Domain d2e5fb_: 2e5f B: [204081]
        automated match to d2decb_
        complexed with edo, po4
  11. 2140515Salmonella enterica [TaxId:90371] [196499] (1 PDB entry)
  12. 2140522Shewanella denitrificans [TaxId:318161] [232451] (1 PDB entry)
  13. 2140525Silicibacter pomeroyi [TaxId:246200] [225589] (1 PDB entry)
  14. 2140530Staphylococcus aureus [TaxId:46170] [270435] (1 PDB entry)

More info for Protein automated matches from c.80.1.0: automated matches

Timeline for Protein automated matches from c.80.1.0: automated matches: