PDB entry 3fj1

View 3fj1 on RCSB PDB site
Description: Crystal structure of putative phosphosugar isomerase (YP_167080.1) from SILICIBACTER POMEROYI DSS-3 at 1.75 A resolution
Class: isomerase
Keywords: YP_167080.1, putative phosphosugar isomerase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Unknown function, ISOMERASE
Deposited on 2008-12-12, released 2009-01-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative phosphosugar isomerase
    Species: Silicibacter pomeroyi DSS-3 [TaxId:246200]
    Gene: SPO1843, YP_167080.1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5LSC5 (1-End)
      • leader sequence (0)
    Domains in SCOPe 2.07: d3fj1a1, d3fj1a2
  • Chain 'B':
    Compound: putative phosphosugar isomerase
    Species: Silicibacter pomeroyi DSS-3 [TaxId:246200]
    Gene: SPO1843, YP_167080.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3fj1b_
  • Chain 'C':
    Compound: putative phosphosugar isomerase
    Species: Silicibacter pomeroyi DSS-3 [TaxId:246200]
    Gene: SPO1843, YP_167080.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3fj1c_
  • Chain 'D':
    Compound: putative phosphosugar isomerase
    Species: Silicibacter pomeroyi DSS-3 [TaxId:246200]
    Gene: SPO1843, YP_167080.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3fj1d_
  • Heterogens: CL, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3fj1A (A:)
gmtqhitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvcty
lsyaaelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgal
cvaltndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraal
gnlpetlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyss
aevlhgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehv
rsghaltdplslivsfysmveafasergidpdaprhlnkvtetv

    Sequence, based on observed residues (ATOM records): (download) 
    >3fj1A (A:)
gmtqhitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvcty
lsyaaelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgal
cvaltndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraal
gnlpetlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyss
aevlhgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehv
rsghaltdplslivsfysmveafasergidpd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3fj1B (B:)
gmtqhitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvcty
lsyaaelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgal
cvaltndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraal
gnlpetlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyss
aevlhgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehv
rsghaltdplslivsfysmveafasergidpdaprhlnkvtetv

    Sequence, based on observed residues (ATOM records): (download) 
    >3fj1B (B:)
hitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvctylsya
aelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgalcval
tndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraalgnlp
etlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyssaevl
hgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehvrsgh
altdplslivsfysmveafasergidpd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3fj1C (C:)
gmtqhitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvcty
lsyaaelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgal
cvaltndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraal
gnlpetlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyss
aevlhgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehv
rsghaltdplslivsfysmveafasergidpdaprhlnkvtetv

    Sequence, based on observed residues (ATOM records): (download) 
    >3fj1C (C:)
itrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvctylsyaa
elllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgalcvalt
ndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraalgnlpe
tlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyssaevlh
gpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehvrsgha
ltdplslivsfysmveafasergidpd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3fj1D (D:)
gmtqhitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvcty
lsyaaelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgal
cvaltndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraal
gnlpetlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyss
aevlhgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehv
rsghaltdplslivsfysmveafasergidpdaprhlnkvtetv

    Sequence, based on observed residues (ATOM records): (download) 
    >3fj1D (D:)
mtqhitrmrreideipeavqrlldhgaqdvarvaavlrlrdpsfvatvargssdhvctyl
syaaelllglpvaslgpsvasvydarlrldralclavsqsgkspdivamtrnagrdgalc
valtndaasplagvsahtidihagpelsvaatktfvtsavaglmlladwaeddglraalg
nlpetlaaasridwpemrvaigarpslftlgrgtslavsneaalkfketcqlhaesyssa
evlhgpvsiveegfpvlgfaagdaaeaplaeiadqiaakgatvfattgrvtrarvlehvr
sghaltdplslivsfysmveafasergidpda